Protein Model on 4qdi_A_1_C_1 (TEMPLATE: 4qdi )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[3D template]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query F)
1 a FA 1 (A) polymer(polypeptide(L)) [457 aa] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase :B7GVN5_ACIB3
2 b C 1 (A) non-polymer(UDP) URIDINE-5'-DIPHOSPHATE 48T 62L 67F 103R 159L
FOCUSED TEMPLATE
MODEL[1] TEMPLATE:4qdi_A_1
4qdi_A_1       1:XXXXXXXXXXXXXXVPLEPWTAQQLQQATQGYWHKDQIPQTEIKRILTDSRHAESGDAFLALKGERFDAHNFVAQVVANGCQVAIVERPIDAEIAQLVVA: 100
SecStr          :--------------     B HHHHHHHHT EEGGG   SS B EEE  TTT  TTEEEE  EETTEEGGGGHHHHHHTT  EEEESS  SSSSEEEE S:    
ExpBur          :--------------eeeeebebeebeebbebebbeeeebeeebeebbeebeebeeebbbbbbeeeeebbbeebeebeeeebebbbbbeeeeeebbbbbbe:    
Contact         :                                               b             b    b                                 

4qdi_A_1     101:DTRLALGQLGAYRREQNAQLKVIALTGSSGKTTTKEMLGSILSRLAPTLITRGNLNNDLGVPMMLLELRKEHQYAVMELGANHQGEIDYTSKIVQPHVAG: 200
SecStr          : HHHHHHHHHHHHHHH TT EEEEEE SS HHHHHHHHHHHHHHHS EEE  TT  STTHHHHHHTT  TT  EEEEE    STTHHHHHHHHH  SEEE:    
ExpBur          :ebeebbbebbebbbeebeebebbbbbbeeebbbbbebbbbbbeeebebbebeeeebeebbbbebbbebeeebebbbbbbbbeeeeebeebbebbebbbbb:    
Contact         :  b                                                       b                                         

4qdi_A_1     201:ILNIGTAHLGEFGGRDGICRAKSEIYRHILPQGVAIVPQQDDFTAEIREAAKSHQIMSFGEGGDVFATEIELLPQSANFQLHTPQGSSFVRLPFAGEHNV: 300
SecStr          :E       TT TTHHHHHHHHHGGGGTT  TT EEEEESSSTTHHHHHHHTTTSEEEEESTTSSBEEEEEEE SS EEEEEEETTEEEEEEESS SHHHH:    
ExpBur          :bbebeeeeeebeeeeebbbebbbbbbeebeeebbbbbbeebebbeebeeebeeeeebbbbeebebeeeeeeeeeeebebebebeeeeeebebebbeeebb:    

4qdi_A_1     301:QNATAAVAFALALGVSLEDIVKGLEQAQGAKGRLNFIQKAPHLFIDDTYNANPTSMRAAAQVLLQQNGIKVMVMGDIGELGDSSWQEHHDLGRDLAELPL: 400
SecStr          :HHHHHHHHHHHHTT  HHHHHHHHHT    TTSSEEEEETTEEEEE  S   HHHHHHHHHHHHTS SEEEEEB   TT TTTHHHHHHHHHHHHTTSS :    
ExpBur          :ebbbbbbbbbbbbebebeebbebbeebeebebebebeeeeeebbbbbbeebeeeebeebbebbbebeebbbbbbbbbeeeeeebeebbeebbeebbebeb:    

4qdi_A_1     401:DHIVAVGQFASAALEGAGLHSTKLKAFQTQAEALPFLINLIQTHQPQSMSFLFKGSRFTHMETLMADLMEK-----------------------------: 471
SecStr          :SBEEEESTTHHHHHHHHSTTTTTEEEES HHHHHHHHHHHHHTT S  EEEEE   GGG HHHHHHHHH -:    
ExpBur          :eebbbbbeebebbeebbeeeeeebbbbeebeebeeebeebbeebeeeebbbbbbbbeebebeebbeebee-:    


Input Residue Numbers for Focused Sites

ex) 2,15,123