[pdbjlvh2]Protein Model on 6nca_X_1_R

Protein Model on 6nca_X_1_R_1 (TEMPLATE: 6nca )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:18]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(HLAA_HUMAN)	X 1 (C)	polymer(polypeptide(L)) [275 aa]	HLA class I histocompatibility antigen, A-2 alpha chain :1A02_HUMAN
2	b		R 1 (V)	polymer(polypeptide(L)) [9 aa]	Replication and transcription activator :RTA_EBVG	31Y 69M 83Y 87E 90N(K) 93A 94Q(H) 97T 100V 101D 104T 105L 108Y 123Y 147Y 167T 171W 179Q 183Y 187T 195Y (identity: 90.5 %/93.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:6nca_X_1 identity=93.1%

queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
6nca_X_1       1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100
SecStr          :  EEEEEEEEEE  SSSSS EEEEEEEETTEEEEEEETT SS S EE SHHHHTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  TTS  EEEEEEE:    
ExpBur          :eebbbbbebebebeeeeeebebebebebbebebbebbeebeeeebeeebebbeebeeebbebbbeebeeebeebeeebeebeeeeeeeeeeebbbebbbb:    
Contact         :      b                                     b             b   b  b  bb  b  bb  bb  b              b 

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
6nca_X_1     101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200
SecStr          :EEE TTSSEEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS  B  EEEEEEEE SSSEEE:    
ExpBur          :bbbbeeeeeeebebebbbeeeebbebeeebeebeeeeebbeebeeeeeeeeebeeeeeebeeebbeebeebbeebeeebeeeeebeeebbeeeeeeeebb:    
Contact         :                      b                   b   b       b   b   b       b                             

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
6nca_X_1     201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275
SecStr          :EEEEEEEEBSS  EEEEEETTEEE SSEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEEE  :    
ExpBur          :bebebeebbebebebebbeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeee:

Protein Model on 6nca_X_1_R_1 (TEMPLATE: 6nca )

Input Residue Numbers for Focused Sites