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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAA_HUMAN) | P 1 (P) | polymer(polypeptide(L)) [274 aa] | MHC class I antigen (Fragment) :U5YJJ6_HUMAN | |
2 | b | S 1 (S) | polymer(polypeptide(L)) [198 aa] | TCR alpha chain | 86Q 89R 90N 179Q 181R 182A 183Y 187T(R) (identity: 87.5 %/96.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8i5c_P_1 identity=96.7% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124 :******** ******************************************************************************** **********: 8i5c_P_1 1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100 SecStr : EEEEEEEEEE TTT S EEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT TT EEEEEEE: ExpBur :eebbbebebebebeeeeeeeebebbbebbeeebbbbbbebeeeebeeebebbeebeeebbeeebeebeeebeebeeebeebeeeeeeeeeeebbbebebb: Contact : b bb queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224 :**** ********************************************** *** **** * *************************************: 8i5c_P_1 101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200 SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS B EEEEEEEESSSSEEE: ExpBur :bbbbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeeeeeeebbeebbeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb: Contact : b bbb b queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298 :******************************************** ******* *********************: 8i5c_P_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGQEQRYTCHVQHEGLPKPLTLRW: 274 SecStr :EEEEEEEEBSS EEEEEETTEE GGGEEE EE SSS EEEEEEEEEETT STTEEEEEE TTSSS EEEE : ExpBur :bebbbebbbbeebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebee: |