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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAA_HUMAN) | F 1 (F) | polymer(polypeptide(L)) [274 aa] | MHC class I antigen (Fragment) :U5YJJ6_HUMAN | |
2 | b | H 1 (H) | polymer(polypeptide(L)) [9 aa] | peptide KRAS-G12V-9 | 31Y 33F(Y) 83Y 87E 94Q 97T 101D 104T 108Y 119I 121I 123Y 138R 140D 167T 170K 171W 174A 176E(A) 179Q 180L(Q) 183Y 191W 195Y (identity: 87.5 %/96.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8i5c_F_1 identity=96.7% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124 :******** ******************************************************************************** **********: 8i5c_F_1 1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100 SecStr : EEEEEEEEEE TTTSS EEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT TT EEEEEEE: ExpBur :eebbbebebebebeeeeeeeebebbbebbeeebbebbbebeeeebeeebebbeebeeebbeeebeebeeebeebeeebeebeeeeeeeeeeebbbebebb: Contact : b b b b b b b b b b b b queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224 :**** ********************************************** *** **** * *************************************: 8i5c_F_1 101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200 SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS B EEEEEEE SSSSEEE: ExpBur :bbbbeebeeeebbbebbbeeeebbebeeebeebeeeeebbeebbeeeeeeebbeebbeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb: Contact : b b b bb b b bb b b b queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298 :******************************************** ******* *********************: 8i5c_F_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWVAVVVPSGQEQRYTCHVQHEGLPKPLTLRW: 274 SecStr :EEEEEEEEBSS EEEEEEETTEE GGGEEE EE SSS EEEEEEEEEETT GGGEEEEEEETTSSS EEEE : ExpBur :bebbbebbbbeebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebee: |