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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAA_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [276 aa] | MHC class I antigen :A0A583ZB34_HUMAN | |
2 | b | F 1 (F) | polymer(polypeptide(L)) [8 aa] | KRAS G12D peptide (VVVGADGVGK) :RASN_HUMAN | 29M 31Y 33F(Y) 69M 83Y 87E 90N 101D 104T 105L 108Y 119I 123Y 140D 167T 170K 171W 174A 179Q 183Y 187T(R) 191W 195Y (identity: 91.3 %/97.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7ow4_D_1 identity=97.5% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124 :******** ******************************************************************************** **********: 7ow4_D_1 1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100 SecStr : EEEEEEEEEEEETTTEEEEEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE: ExpBur :eebbbbbebebebeeeeeeeebebebebbebebbebeeeeeeeebeeebebbeebeeebbeebbeebeebbeebeeebeebeeeeeeeeeeebebebbbb: Contact : b b b b b b b b bb b b b queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224 :**** ********************************************** *** **** * *************************************: 7ow4_D_1 101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200 SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEESSSSEEE: ExpBur :bbbbeebeeeebebebbbeeeebbebeeebeebebeeebbeebeeeeeeeebbeebeebbebebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb: Contact : b b bb b b b b b b queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299 :***************************************************************************: 7ow4_D_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 275 SecStr :EEEEEEEEBSS EEEEEETTEEE TTEEE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE : ExpBur :bbbbbeebbbbebebebbeeeeeeeeeeeebeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebeee: |