CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAA_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [275 aa] | HLA class I histocompatibility antigen, A-2 alpha chain :1A02_HUMAN | |
2 | b | F 1 (F) | polymer(polypeptide(L)) [9 aa] | Protein Tax-1 :TAX_HTL1F | 29M 31Y 33F 69M 83Y 87E 90N(K) 91V 94Q(H) 96Q 97T 100V 101D 104T 105L 108Y 123Y 140D(Y) 167T 170K 171W 176E(V) 179Q 180L 183Y 187T 191W 195Y (identity: 85.7 %/93.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4e5x_D_1 identity=93.1% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124 :************************************************************* *** *** *** ******************** * ***: 4e5x_D_1 1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100 SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS S EESSGGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SSS EEEEEEE: ExpBur :eebbbbbebebebeeeeeebebebbbebbebebbebbbebeeeebbeebebbeebeeebbebbbeebeeebeebeebbeebeeeeeeeeeeebebebbbb: Contact : b b b b b b bb b bb bb bb b b queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224 :****** ****** * ********** ************** ** ****** ******** ********************** ******** ******: 4e5x_D_1 101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200 SecStr :EEE STT EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEE SSSEEE: ExpBur :bbbbeeeeeeebebebbbeeeebbebeeebeebeeeeebbeebeeebeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebbeeeeeeeebe: Contact : b b bb b bb b b b b queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299 :****** ********************************************* **********************: 4e5x_D_1 201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275 SecStr :EEEEEEEEBSS EEEEEESSSB SSSEEE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE : ExpBur :bebbbeebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeeeeee: |