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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAA_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [275 aa] | HLA CLASS I HISTOCOMPATIBILITY ANTIGEN, A-2.1 :1A02_HUMAN | |
2 | b | F 1 (F) | polymer(polypeptide(L)) [9 aa] | 65 KDA PHOSPHOPROTEIN :PP65_HCMVA | 29M 31Y 33F 69M 87E 90N(K) 91V 94Q(H) 97T 100V 101D 104T 108Y 121I(R) 123Y 140D(Y) 167T 170K 171W 183Y 187T 191W 195Y (identity: 82.6 %/93.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2x4r_D_1 identity=93.1% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124 :************************************************************* *** *** *** ******************** * ***: 2x4r_D_1 1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100 SecStr : EEEEEEEEEE TTSSS EEEEEEEETTEEEEEEETTSSS S EE STTGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TT EEEEEEE: ExpBur :eebbbebebebebeeeeeeeebebebebbebebbebbeebeeeebeeebebbeebeeebbebbbeebeeebeebeeebeebeeeeeeeeeeebebebbbb: Contact : b b b b b bb b b bb b b b b queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224 :****** ****** * ********** ************** ** ****** ******** ********************** ******** ******: 2x4r_D_1 101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200 SecStr :EEE TT SEEEEEEEEEESSSEEEEE TTSS EEE SSHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEE SSSSEEE: ExpBur :bbbbeeeeeeebbbebbbeeeebbbbeeebeebebeeebbeebeeebeeeeebeebeeebeeebbeebeebbeebeeebeeeeebeeebbeeeeeeeebb: Contact : b b bb b b b b queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299 :****** ********************************************* **********************: 2x4r_D_1 201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275 SecStr :EEEEEEEEBSS EEEEEETTEE GGG EE EE SSS EEEEEEEEEETTGGGGEEEEEE TT SS EEEE : ExpBur :bbbbbeebbbbebebebbeeeeebeeeeeebeeeeeeeebbebbbbbebeeeebeebbbebebeebeeeeebeee: |