CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAA_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [275 aa] | HLA-A*02:01 | |
2 | b | E 1 (P) | polymer(polypeptide(L)) [10 aa] | Melanoma antigen recognized by T-cells 1 :MAR1_HUMAN | 29M 31Y 33F 69M 87E 90N(K) 91V 94Q(H) 97T 101D 104T 105L 121I(R) 123Y 140D(Y) 167T 170K 171W 174A 176E(V) 179Q 180L 183Y 187T 191W 195Y (identity: 80.8 %/93.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7tr4_A_1 identity=93.1% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124 :************************************************************* *** *** *** ******************** * ***: 7tr4_A_1 1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100 SecStr : EEEEEEEEEE TTTSS EEEEEEEETTEEEEEEETTSSS S EE STGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT SSS EEEEEEE: ExpBur :eebbbbbebebebeeeeeebebebebebbebebbebeeeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebeeeeeeeeeeebebebbbb: Contact : b b b b b bb b b b bb b b queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224 :****** ****** * ********** ************** ** ****** ******** ********************** ******** ******: 7tr4_A_1 101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200 SecStr :EEE TT EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEE SSSSEEE: ExpBur :bbbbeebeeeebebebbbeeeebbbbeeebeebebeeebbeebeeebeeeebbeeeeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb: Contact : b b bb b b bb b b b b queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299 :****** ********************************************* **********************: 7tr4_A_1 201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275 SecStr :EEEEEEEEBSS EEEEEETTEE TTEEE EE SSS EEEEEEEEEETT TTSEEEEEE TTSSS EEEE : ExpBur :bbbbbeebbbbebebebbbeeeeeeeeeeeeeeeeeeeebbebbbbbebeeeeeebbbbbbebeebeeeeeeeee: |