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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAA_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [275 aa] | MHC class I antigen, A-2 alpha chain :A0A5B8RNS7_HUMAN | |
2 | b | D 1 (B) | polymer(polypeptide(L)) [100 aa] | Beta-2-microglobulin :B2MG_HUMAN | 32F 33F 34T 36V 47I 49V 51Y 56Q 59R 72R 117H 120Q 121I(R) 122M 139Q 140D(Y) 141A 143D 144G 145K 146D 214T 216H 226R 228W 255V 256E 257T 258R 259P 260A 261G 262D 266Q 268W (identity: 94.3 %/93.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6vm8_A_1 identity=93.1% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124 :************************************************************* *** *** *** ******************** * ***: 6vm8_A_1 1:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 100 SecStr : EEEEEEEEEE TTTSS EEEEEEEETTEEEEEEETTSSS S EE SGGGGGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE: ExpBur :eebbbebebebebeeeeeebebebbbebbebebbebbeeeeeeebeeebebbeebeeebbeebbeebeeeeeebeebbeebeeeeeeeeeeebebebbbb: Contact : bbb b b b b b b b b bbb queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224 :****** ****** * ********** ************** ** ****** ******** ********************** ******** ******: 6vm8_A_1 101:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 200 SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHS B EEEEEEEESSSSEEE: ExpBur :bbbbeeeeeeebbbebbbeeeebbebeeebeebeeeeebbeebeeebeeeeebeeebeebeeebbeebeebbeebeeebeeebebeeebeeeeeeeeebb: Contact : bbb bbbb b b queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299 :****** ********************************************* **********************: 6vm8_A_1 201:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 275 SecStr :EEEEEEEEBSS EEEEEETTEEE TTEEE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEEE : ExpBur :bbbbbeebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebeee: Contact : b b bbbbbbbb b b |