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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HLAA_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [274 aa] | HLA class I histocompatibility antigen, A-11 alpha chain :1A11_HUMAN | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [6 aa] | Epstein Barr Virus, Latent Membrane Protein 2 epitope | 29M 31Y 33F(Y) 87E 90N 94Q 123Y 138R 179Q 183Y 187T(R) 191W 195Y (identity: 84.6 %/97.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5grg_A_1 identity=97.4% |
queryA 25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124 :******** ******************************************************************************** **********: 5grg_A_1 1:GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEDGSHTIQIMYG: 100 SecStr : EEEEEEEEEE TTS S EEEEEEEETTEEEEEEETTSSS S EE SGGGTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTS EEEEEEE: ExpBur :eebbbbbebebebbeeeeebebebebebbebebbebebeeeeeebeeebebbeebeeebbeebbeebeeebeebeeebeebeeeeeeeeeeebebebebb: Contact : b b b b b b b queryA 125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224 :**** ********************************************** *** **** * *************************************: 5grg_A_1 101:CDVGPDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHAAEQQRAYLEGRCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 200 SecStr :EEE TTS EEEEEEEEEETTEEEEEE TTSS EEESSHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT B EEEEEEEESSSSEEE: ExpBur :bbbbeebeeeebebebbbeeeebbbbeeebeebeeeeebbeebeeeeeeeebbeebeeebeeebbeebeebbeebeeebeeeeebeeebeeeeeeeeebb: Contact : b b b b b b queryA 225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 298 :**************************************************************************: 5grg_A_1 201:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRW: 274 SecStr :EEEEEEEEBSS EEEEEETTEE GGG EE EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEE : ExpBur :bbbbbebbbbbebebebeeeeeebeeebeeeeeeeeeeebbebbbbbebeeeebeebbbbbebeebeeeeebee: |