Protein Model on 7mj9_A_1_B_1 (TEMPLATE: 7mj9 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HLAA_HUMAN) A 1 (A) polymer(polypeptide(L)) [275 aa] MHC class I antigen :Q861F7_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [100 aa] Beta-2-microglobulin :B2MG_HUMAN 30R 32F 33F 34T 36V 47I 49V 51Y 56Q 59R 117H 120Q 121I(R) 139Q 140D(Y) 141A 143D 144G 146D 214T 226R 228W 255V 256E 258R 259P 260A 261G 262D 266Q 268W (identity: 93.5 %/93.1 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7mj9_A_1 identity=93.1%
queryA        25:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDQETRNVKAQSQTDRVDLGTLRGYYNQSEAGSHTIQIMYG: 124
                :************************************************************* *** *** *** ******************** * ***:
7mj9_A_1       2:GSHSMRYFFTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDAASQRMEPRAPWIEQEGPEYWDGETRKVKAHSQTHRVDLGTLRGYYNQSEAGSHTVQRMYG: 101
SecStr          :  EEEEEEEEEE  TTSS  EEEEEEEETTEEEEEEETTSSS S EE SGGGTTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT  SSS  EEEEEEE:    
ExpBur          :eebbbebebebebeeeeeebebebebebbeeebbebbeebeeeebbeebebbeebeeebbebbbeebeeebeebeebbeebeeeeeeeeeeebebebbbb:    
Contact         :     b bbb b          b b b    b  b                                                         b  bb   

queryA       125:CDVGSDGRFLRGYRQDAYDGKDYIALNEDLRSWTAADMAAQITKRKWEAAHEAEQLRAYLDGTCVEWLRRYLENGKETLQRTDPPKTHMTHHPISDHEAT: 224
                :****** ****** * ********** ************** ** ****** ******** ********************** ********  ******:
7mj9_A_1     102:CDVGSDWRFLRGYHQYAYDGKDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQLRAYLEGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT: 201
SecStr          :EEE TT  EEEEEEEEEETTEEEEEE TTSSSEEE SHHHHHHHHHHHHTTHHHHHHHHHHTHHHHHHHHHHHHTHHHHT  B  EEEEEEEESSSSEEE:    
ExpBur          :bbbbeebeeeebbbebbbeeeebbebeeebeebebeeebbeebbeebeeeeebeeebeebebebbeebeebbeebeeebeeebebeeebeeeeeeeeebb:    
Contact         :              bbb bb b                                                                   b          

queryA       225:LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGEEQRYTCHVQHEGLPKPLTLRWE: 299
                :****** ********************************************* **********************:
7mj9_A_1     202:LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLPKPLTLRWE: 276
SecStr          :EEEEEEEEBSS  EEEEEETTEEE TTEEE   EE SSS EEEEEEEEEETT GGGEEEEEE TT SS EEEE  :    
ExpBur          :bebbbeebbbbebebebeeeeeebeeeeeeeeeeeeeeebbebbbbbebeeeebeebbbbbebebbeeeeebeee:    
Contact         : b b                          bb bbbbb   b b                                                        


Input Residue Numbers for Focused Sites

ex) 2,15,123