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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
FOCUSED SITES | template(8dvs_A auth_asym_id:A) | ||||||
SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
647 | I | 647 | 647 | I | H | b | 2.3 |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [682 aa] | Antiviral innate immune response receptor RIG-I :DDX58_HUMAN |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8dvs_A_1 identity=100.0% |
queryA 241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340 :****************************************************************************************************: 8dvs_A_1 241:FKPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVEN: 340 SecStr : HHHHHHHTTTTTTS B B TTS HHHHHHHHHHHHTTSS TT EEE SSHHHHHHHHHHHHHHHTTTT EE TTT SSS HHHHHHT: ExpBur :eeeeebbebbbeebeeeebbbbbbeeebebebbbbbbbeebbeeeeeeeebbbbbbbeeeebbeebeeebeeebeeeebebebbbeeeeeeeebeeebee: queryA 341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440 :****************************************************************************************************: 8dvs_A_1 341:NDIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIA: 440 SecStr : SEE HHHHHHHHHTTS S GGG SEEEEBTGGG SS HHHHHHHHHHHHHTTS S EE BBS SS SHHHHHHHHHHHHHHHT B : ExpBur :bbbbbbbbebbbebbeeebbeebeebebbbbbbbbbbeeeebbbebbbebbebeeeeeeeebbbbbbbbbbbbbeebeeeeebbeebbebbbbbbbbbbb: queryA 441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540 :****************************************************************************************************: 8dvs_A_1 441:TVKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFL: 540 SecStr : TTHHHHTTTS B EEE S HHHHHHHHHHHHHHHHHHHH TT TTSS S TTSHHHHHHHHHHHHHHHT TTSSHHHHHHHHHHH: ExpBur :ebeeeeeebeeebeebebeeeebeebeeeebeebbbebbeebbebbeeebeebeeebebeebebbeeebeebbeebbeebbeeeeeeeeebeebbbbbbb: queryA 541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640 :****************************************************************************************************: 8dvs_A_1 541:YTSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALV: 640 SecStr :HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHH GGG HHHHHHHHHHHHHHHH SS B EES HHHH: ExpBur :bbebbeebbbbbebbebbbbebbbeebeebbeebeeeeeeebbeebbebbeeebeebeebbeeeebebebbeebbebbeebbeeeeebbbbbbbeeeebb: queryA 641:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740 :****************************************************************************************************: 8dvs_A_1 641:DALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFL: 740 SecStr :HHHHHHHHT TT S B B TTSS S HHHHHHHHHT SSSSS SB B GGGSSS SEEEEES HHHHHHHHTT SSS EEEE: ExpBur :ebbeebbeebeebeebebbbbbbeeeeeeeeebeeeebeebbebbeeeeebbbbbbbebbbeebebeebbbbbbbbbeeebbebbbbbbbbebeebebbb: queryA 741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840 :****************************************************************************************************: 8dvs_A_1 741:LTSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDSQEKPKPVPDKENKKLLCRKCKALACYTADVRVIEECHYTVLGDAFKE: 840 SecStr :EES HHHHHHHHHHHHHHHHHHHHHHHHTTS HHHHHHHHHHHHHHHHHHHHH B S EEEEETTT EEEESTTEEESSSS EEE SHHHHT: ExpBur :bbbeeebbeebeebeebbebbeebbeebeeeeeeebeeebeebbeeebeebeeeeeeeeeeeeeebbbbbbbbbbebbebeebbbbeeeebbbeeeebee: queryA 841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922 :**********************************************************************************: 8dvs_A_1 841:CFVSRPHPKPKQFSSFEKRAKIFCARQNCSHDWGIHVKYKTFEIPVIKIESFVVEDIATGVQTLYSKWKDFHFEKIPFDPAE: 922 SecStr :TEEEEE SS SSS EEEEE SSS B EEEEESSSSEEEEE GGGEEEEESSS EEE SSGGG B EE S : ExpBur :ebeeeebeeeeeeeebebebbbbbeeeebebebbbbbebeeeebbbbebebbbbbbeeebebeeeeebeebebeeeebeeee: |