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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
FOCUSED SITES | template(4a2w_A auth_asym_id:A) | ||||||
SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
63 | E | 65 | 62 | Q | T | e | 82.1 |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(RIGI_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [678 aa] | RETINOIC ACID INDUCIBLE PROTEIN I :D3TI84_ANAPL |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4a2w_A_1 identity=51.3% |
queryA 2:TTEQRRSLQAFQDYIRKTLDPTYILSYMAPWFREEEVQYIQAEKNNKGPMEAATLFLKFLLELQEEGWFRGFLDALDHAGYSGLYEAIESWDFKKIEKLE: 101 :* **** ** * * * * * * * * ** *** * * ***** *** *** ** **** *** * ****: 4a2w_A_1 5:TADEKRSLQCYRRYIERSLNPVYVLGNMTDWL-PDELRERIRKEEERGVSGAAALFLDAVLQLEARGWFRGMLDAMLAAGYTGLAEAIENWDFSKLEKLE: 103 SecStr : HHHHHHHHHTHHHHHTT GGGTSTT TTTS- TTHHHHHHHHHTT HHHHTTTTTHHHHT STTHHHHHHHHHHHHT HHHHHHHHTT HHHHHHH: ExpBur :eeeebeebeeebebbeebbbbbbbbeebeeeb-eeebbeebeeeeeeebeebbeebbebbbebeeeebbebbbebbeebbbeebbebbeeeebeebeebb: queryA 102:EYRLLLKRLQPEFKTRIIPTDIISDLSECLINQECEEILQICSTKGMMAGAEKLVECLLRSDKENWPKTLKLALEKE-RNKFSELWIVEKGIKDVETEDL: 200 : * **** * * * *** ***** ** ** ** *** ***** *** * *** **** : 4a2w_A_1 104:LHRQLLKRIEATM-LEVDPVALIPYISTCLIDRECEEIQQISENRSKAAGITKLIECLCRSDKEHWPKSLQLALDTTGYYRASELW--------------: 188 SecStr :HHHHHHHHHHHHH-TTS HHHHTTTTTTTS HHHHHHHHHHHHHT HHHHHHHHHHHHHS TTHHHHHHHHHHHTT HHHHHTT--------------: ExpBur :eebebbebbbbbb-bebebeebbeebeebbbeebbeebeebbeeebebbbbebbbebbbbbbbeebbebbbebbeeebeeebbebb--------------: queryA 201:EDKMETSDIQIFYQEDPECQNLSENSCPPSEVSDTNLYSPF-----------------------------------------------------------: 241 : : 4a2w_A_1 189:-----------------------------------------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 247 SecStr :----------------------------------------- ----------------------------------------------------------: ExpBur :-----------------------------------------e----------------------------------------------------------: queryA 242:KPRNYQLELALPAMKGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFANQIPVYEQQKSVFSKYFERHGYRVTGISGATAENVPVEQIVENN: 341 :* * ** *** ** *** ****** ****** ****** * * * **** * ******* ** *** ** * **** ** * : 4a2w_A_1 248:KARSYQIELAQPAINGKNALICAPTGSGKTFVSILICEHHFQNMPAGRKAKVVFLATKVPVYEQQKNVFKHHFERQGYSVQGISGEXXXXXSVEKVIEDS: 347 SecStr : HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHTTTTT SS EEEE SSHHHHHHHHHHHHHHHHTTT EEEE ----- HHHHHH : ExpBur :ebeebbeebbebbeeeebbbbbbeeebebeebbbbbbeebbeebeeeeebbbbbbbbeeebbeebeeebeeebeeeeeebeebeee-----ebeeebeeb: queryA 342:DIIILTPQILVNNLKKGTIPSLSIFTLMIFDECHNTSKQHPYNMIMFNYLDQKLGGSSGPLPQVIGLTASVGVGDAKNTDEALDYICKLCASLDASVIAT: 441 :*** ******* ** **************** **** * ** ** * *** ********* *** * ** ** ** * *: 4a2w_A_1 348:DIIVVTPQILVNSFEDGTLTSLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKF-NSASQLPQILGLTASVGVGNAKNIEETIEHICSLCSYLDIQAIST: 446 SecStr :SEEEE HHHHHHHHHSSS GGG SEEEEETGGG STT HHHHHHHHHHHHHH-TT S EEEEEES TT SHHHHHHHHHHHHHHHT SEEE : ExpBur :ebbbbbbebbbebbeeeebeebeebbbbbbbebeebeeeebbbebbeebbebee-eeeeeebbbbbbbeebebeebeeeeebbeebbebbbebbbebbbb: queryA 442:VKHNLEELEQVVYKPQKFFRKVESRISDKFKYIIAQLMRDTESLAKRICKDLENLSQIQNREFGTQKYEQWIVTVQKACMVFQMPDKDEESRICKALFLY: 541 :* * ** ** * * ** * ** ** ** * * **** ** *** * * * ** ****** *** : 4a2w_A_1 447:VRENIQELQRFMNKPEIDVRLVKRRIHNPFAAIISNLMSETEALMRTI-XXXXXXXXXXXXDFGTQNYEHWIVVTQRKCRLLQLEDKEEESRICRALFIC: 545 SecStr : SSHHHHHHHS EEEEE S HHHHHHHHHHHHHHHHHHH ------------- SSHHHHHHHHHHHHHHHH S HHHHHHHHHHHHHH: ExpBur :beeeeeebeeebeebebeeeebeebeebebbebbeebbeebbeebeee-------------eeeeeebbeebeebbeebeeeeeeeeeebeeebbbbbbb: queryA 542:TSHLRKYNDALIISEHARMKDALDYLKDFFSNVRAAGFDEIEQDLTQRFEEKLQELESVSRDPSNENPKLEDLCFILQEEYHLNPETITILFVKTRALVD: 641 :* ************* ** *** ** ** ** * ** ** * ** ** * * ******* * ** * ** * * ** ****** : 4a2w_A_1 546:TEHLRKYNDALIISEDARIIDALSYLTEFFTNVKNGPYTELEQHLTAKFQEKEPELIALSKDETNENPKLEELVCILDDAYRYNPQTRTLLFAKTRALVS: 645 SecStr :HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHHHHHHTSTT HHHHHHHHHHHHTTTS TT EEEEESSHHHHH: ExpBur :bbbbbbbbbbbbbbebbbbebbbebbeebbebbeebeeeebbeebbeebeeeeeebeebbeeeebebebbeebbebbbebbeeeeebebbbbbbbebbbe: queryA 642:ALKNWIEGNPKLSFLKPGILTGRGKTNQNTGMTLPAQKCILDAFKASGDHNILIATSVADEGIDIAQCNLVILYEYVGNVIKMIQTRGRGRARGSKCFLL: 741 :*** * ** * *** * * ****** * ***** **** *** **** **** * : 4a2w_A_1 646:ALKKCMEENPILNYIKPGVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNRLLIATSVXXXXXXIVQCNLVVLYEYSGNVTKMIQVXXXXXXXGSKCILV: 745 SecStr :HHHHHHHH STTSS EE ---------------------------- SEEEEE ------ SEEEEES S SHHHH ------- EEEE: ExpBur :bbeebbeebeebeebebbee----------------------------eeebebbeee------eeeeebbbbbbeeeebeebbee-------eeebbbb: queryA 742:TSNAGVIEKEQINMYKEKMMNDSILRLQTWDEAVFREKILHIQTHEKFIRDS: 793 :** * * * * *** *** * *** * ** * * ***: 4a2w_A_1 746:TSKTEVVENEKCNRYKEEMMNKAVEKIQKWDEETFAKKIHNLQMKERVLRDS: 797 SecStr :ES HHHHHHHHHHHHHHHHHHHHHHHHHTS HHHHHHHHHHHHHHHHHTT : ExpBur :bbeeebbeebeeeeeeeebbeebbeebbeeeeeebeeebeebbeeebeeeee: |