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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
FOCUSED SITES | template(7ytx_B auth_asym_id:B) | ||||||
SiteNum | AA | label_ seq_id |
auth_ seq_id |
AA | Sec | Exp/Bur | RelAcc |
437 | T | 415 | 437 | T | e | 82.5 |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [750 aa] | Toll-like receptor 8 :TLR8_HUMAN |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7ytx_B_1 identity=94.9% |
queryA 32:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELL: 131 :********************************************************************* ********************: 7ytx_B_1 10:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXNGLNITDGAFLNLKNLRELL: 109 SecStr : SSSEEEEETTEEEEE TTS SS S TTEEEEE SS EE TTTT S TT EE S S ----------- EE TTSSTT S EEE: ExpBur :beebbbeeeeeebbebebbebeeeebbeebeeebbebebbebebeebeeebbeebeebeebebbebbee-----------ebbebeebbbeebeebeebb: queryA 132:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 231 :****************************************************************************************************: 7ytx_B_1 110:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 209 SecStr : SS SS SS TT EEE SS EE HHHHTT TT EEE SSSSS SS SS EE TTTTTS TT EEE SS SS SS TT EEE S: ExpBur :bbebebeebbeebbebbeebbbbbbbbeebeeebbeebeebebbbbbbbbbeeeebeebeeeebbbeebeebebbbbbbbbbeebbeebbeebeebebbb: queryA 232:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 331 :****************************************************************************************************: 7ytx_B_1 210:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 309 SecStr :S EE SGGGTT TT EEE SSS SS SS SSSS EE GGGGSS S EEE SS SS SSTTTT TT EEE SS HHHHHS S: ExpBur :bebeebbeeebeebeebbbbbbbbbbbbeeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebebbbbeebeebebbbbbbbebeebbeebe: queryA 332:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 431 :****************************************************************************************************: 7ytx_B_1 310:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 409 SecStr :GGGS SS EEE S TT SS GGGTT TT EEE TT SEE TTTTHHHHT TT EEE SS SEE GGGGGS SS EEE SS : ExpBur :bbeebeebeebbbbbbbeeeeeeeebebbeebeebeebebbbbebbbbeebeeebbebbbebeebbbbbbbbbebeebebebbeebeebebbbbbebebe: queryA 432:PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 531 :****** ***********************************************************************: 7ytx_B_1 410:PLVKDTXXXXXXXXXXXXXXXXXXXXXXXFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 509 SecStr : S ----------------------- TTS SSS S SS HHHHTSS EEE SS SS TTTTTT SEEE SS B S TTTT : ExpBur :beeeee-----------------------eebeeeebeeeeeebeeebeeeeebbbbbebebeebbebbbeebbebbbbbbbebebbbebebebbeebee: queryA 532:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 631 :****************************************************************************************************: 7ytx_B_1 510:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 609 SecStr : EEE SB B STTTTTT TT EEE SB S TTSSS GGGTT SS EEE TT SS S SS EEE SS HHHHHT TT : ExpBur :bebbbbbebebbbbebebbebbeebbbbbbbebebeeeeeeebbbbebbeebeebeebbbbebebebbebeeebebebbeebbbbbbbbbebbebeeeeb: queryA 632:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 731 :****************************************************************************************************: 7ytx_B_1 610:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 709 SecStr :SSTTTT TT EEE SS S HHHHTTS TT SEEE SS GGGGGG TT EEE SS S TTT SS EEE SS S S: ExpBur :bbbbebbeebebbbbbebebeebbeebbeebbebbeebbbbebebeebebebbeebeebebbbbeebebeebeeeebebbeebebbbbbebebeebbeee: queryA 732:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLELTT: 821 :************************ ************************************************************: 7ytx_B_1 710:LSEVSSLKHLDLSSNLLKTINKSAXXXXXXTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLELTT: 799 SecStr :S S SEEE SS S S ------ EEE S EE SSTTHHHHHHHHHS SSB SSGGG BEEESTTTTTSBSSS : ExpBur :eeeebbbeebbbbebebeebeeeb------eebeebbbbebebebeeebbebbebbeeeeebebeebbebebeeeeebeeebbbebeeee: |