Protein Model on 6oa9_F_1_T_1 (TEMPLATE: 6oa9 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[3D template]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query F)
1 a FF 1 (F) polymer(polypeptide(L)) [533 aa] Cell division control protein 48 :CDC48_YEAST
2 b T 1 (F) non-polymer(ATP) ADENOSINE-5'-TRIPHOSPHATE 216I 217G 257P 258G 259T 260G 261K 262T 263L 394H 418G 419A
FOCUSED TEMPLATE
MODEL[1] TEMPLATE:6oa9_F_1
6oa9_F_1       1:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 100
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

6oa9_F_1     101:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 200
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

6oa9_F_1     201:XXXXXXXXNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAF: 300
SecStr          :--------    STT  S  TTHHHHHHHTHHHHH STTT SS       EEEE  TTS HHHHHHHHHHHHT EEEEEEHHHHHSS HHHHHHHHHHHH:    
ExpBur          :--------eeebeeebbbbeebbeebeeebeebbebeeeeeeeeeebebbbbbbbeeebebeebbebbbeeeebebeebebeeeeeeeeeebbbebeebb:    
Contact         :               bb                                       bbbbbbb                                     

6oa9_F_1     301:EEAEKNAPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKL: 400
SecStr          :GGGTTSSSEEEEEE  TTTS  TTS   TTTTHHHHHHHHHHTTTTTT S EEEEEES GGGS TTTS TTTS  EEE     TTHHHHHHHHHTSS  B:    
ExpBur          :eebeeeeebbbbbbebbebbeebeebeeeeeeebbebeeebbeebeeeeebbbbbbbeebebbbeebeeeeebeeebebeebeeebbbebbebebeeeee:    
Contact         :                                                                                             b      

6oa9_F_1     401:ADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDXXXXXXXXXXXXXXDSLGVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIKEELK: 500
SecStr          : SS  SSHHHHH SS  HHHHHHHHHHHHHHHHHTT  --------------    B HHHHHHHHTT      SS         GGGS S HHHHHHHH:    
ExpBur          :eeeeeeeebbeebebbbeebbeebbeebbebbeeeeee--------------eeeebebebbeebeeebeeeeeeeeeebeeeeebeebbeeeebbeebe:    
Contact         :                 bb                                                                                 

6oa9_F_1     501:ETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDQLDSIAKARGGSL: 600
SecStr          :TTTTTTTT THHHHTTT     EEEEESSTTSSHHHHHHTHHHHTT   EE  STHHHHS TTTTTTHHHHTHHHHHHT SEEEE    TTTTTSSS   :    
ExpBur          :ebbbebeeeeeebeeeeeeebebbbbbbbeeeebeebbebbbebbebebbbbebeebeebeeeebbeeeeeeeeebeebeebbbbeeeebebeeeeeeee:    

6oa9_F_1     601:GDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYI: 700
SecStr          :SS STTTSTTHHHHHHHSS   SSS EEEE   S  SSS SSS STTTEEEEEE     HHHHHHHHHHHTTSS   TT  SHHHHTT SS  TTTTTTH:    
ExpBur          :eeeebebeebbebeeeeeeeeeeeeebbbbbbbeebeebeeeebeeebbeeebbbeeeeeebbbebbebeeeeeeeeeebebeebbeebebbbbbbbeeb:    

6oa9_F_1     701:VQRAAKYAIKDSIEAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITKEHFAEAMKTAKRSVSDAELRRYEAYSQQMKASRGQF---------: 791
SecStr          :HHHGGGSTTHHHHS  ------------------------------------  STTTTTTSSSS     STTTTTTTTTTTTTTTS S -:    
ExpBur          :beebeeeeeeeeeeee------------------------------------eeeebbeebeeebeeebeeeeeebbeebeeebeeeebe-:    


Input Residue Numbers for Focused Sites

ex) 2,15,123