Protein Model on 4erm_C_1_Q_1 (TEMPLATE: 4erm )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[3D template]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query F)
1 a FC 1 (C) polymer(polypeptide(L)) [731 aa] Ribonucleoside-diphosphate reductase 1 subunit alpha :RIR1_ECOLI
2 b Q 1 (C) non-polymer(DTP) 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE 9K 10R 15E 16R 17I 18N 21K 22I 25V 55T 58I 59H 62I 87F
FOCUSED TEMPLATE
MODEL[1] TEMPLATE:4erm_C_1
4erm_C_1       1:XXXXXXVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPP: 100
SecStr          :------ B TTS B    HHHHHHHHHHHTTT SS  HHHHHHHHT    TT BHHHHHHHHHHHHHTT  SS TTHHHHHHHHHHHHHHHHHTSSSS  :    
ExpBur          :------eebeeeeeeeeeeeebeebbeebbeebeebeeeebeeebeeeeeeebeebebbeebbebbbebbeeebbbbbebbbebbbbbbbeebbeeeebe:    
Contact         :        bb    bbbb  bb  b                             b  bb  b                        b             

4erm_C_1     101:ALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAV: 200
SecStr          : HHHHHHHHHHHTSS THHHHHS HHHHHHHTTT  GGGGGGS HHHHHHHHHTTS B TTT  B   HHHHHHHHHHHHTTTS HHHHHHHHHHHHHHH:    
ExpBur          :ebeebbeebbeeebbbebbeeebeeebbeebeebbeeeebeebbbbbbbbbbbebbbbeeeeeebbbbbbbbbbbbbbbbbbebeeeebbebbeebbebb:    

4erm_C_1     201:STFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGG: 300
SecStr          :TTTSEE  HHHHHHTTSS      EEEE   SSHHHHHHHHHHHHHHHTTT EEEE GGGS  TT EEGGGTEE   SHHHHHHHHHHHSTTSSTTSSS :    
ExpBur          :bebebbbbeebbebbbbeeeebbbbbbbbbbeeeebbebbbebbeebbebebbbbbbbbebbbeebeeeeeeeebebbbebbeebbebbbeebeeeeeee:    

4erm_C_1     301:AATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFS: 400
SecStr          : BEEEEETTBTTHHHHTTTT SSS GGG   SSEEEEEE HHHHHHHHTT EEE B TTTSTTHHHHHHH HHHHHHHHHHHHH TTS   EEEHHHHHH:    
ExpBur          :ebbbbbbbbbbbbeebbebbeeeeeeeebbeebbbbbbbbebbbbbbeeeeebbbbbbeebeebbebbbeeeeebeebbeebbeeeebeeeebebeebbe:    

4erm_C_1     401:LMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPI: 500
SecStr          :HHHHHHHHTS EEEEEHHHHHHSSSB TTTS      TTS      B  SSTT SS B  B  EEEEEGGG SSGGGHHHHHHHHHHHHHHHHHHS  SS:    
ExpBur          :ebbebbeeebebbbbbbbbbbebbbbbeeebbbbbbbbbbbbbbbbeebeeeebeebbbbbbbbbbbbbeebeebeebeebbbbbbbbbbbbbebbebeb:    

4erm_C_1     501:PAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWE: 600
SecStr          :HHHHHHHHHT   EEEEE HHHHHHHTT  SSS TTHHHHHHHHHHHHHHHHHHHHHHHHHH   TTGGGBGGGGT  TTTSS GGGGGT      S HH:    
ExpBur          :ebbeebbebbbbbbbbbbbbbbbbbeeeeebeebebbebbbebbbbbbbbbbebbbebbeeeeebebbebbbbeebebbbeebeeebeebbebeeebebe:    

4erm_C_1     601:ALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYD: 700
SecStr          :HHHHHHHHH  SSS    B   SHHHHHTT  STTS  SSTEEEEE SSSEEEEE TTTTT SSS   TTTSS STTHHHHHHHHHTT SS B    EE :    
ExpBur          :ebbeebeeebbbbbbbbbbbebebbbbbbbbbebbbbbebbeeeeebeeeebebbbbebeebeebbbbbeebeebebbbebbbbbbbbbbbbbbbbbbbb:    

4erm_C_1     701:PSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDG---------------------------------------------------------------: 737
SecStr          :TTSSGGG   HHHHHHHHHHHHHTT  EE   EE  -:    
ExpBur          :eeeeeeeeeeeeebbebbebbbebbbbbbbbbeeee-:    


Input Residue Numbers for Focused Sites

ex) 2,15,123