Protein Model on 3j2t_G_1_U_1 (TEMPLATE: 3j2t )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query F)
1 a FG 1 (G) polymer(polypeptide(L)) [1144 aa] Apoptotic protease-activating factor 1 :APAF_HUMAN
2 b U 1 (G) non-polymer(ATP) ADENOSINE-5'-TRIPHOSPHATE 131V 132F 133V 135R 161M 162A 163G 164C 165G 166K 167S 168V 292L 300I 327P 328L 331S 365Y 366D
FOCUSED TEMPLATE
MODEL[1] TEMPLATE:3j2t_G_1
3j2t_G_1       1:XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX: 100
SecStr          :----------------------------------------------------------------------------------------------------:    
ExpBur          :----------------------------------------------------------------------------------------------------:    

3j2t_G_1     101:XXXXXXXXXXGITSYVRTVLCEGGVPQRPVVFVTRKKLVNAIQQKLSKLKGEPGWVTIHGMAGCGKSVLAAEAVRDHSLLEGCFPGGVHWVSVGKQDKSG: 200
SecStr          :----------   HHHHHHTTT SS    SS    HHHHHHHHHHHGGGTTS  EEEEE  TTTTHHHHHHHHT  HHHHHTT TT EEEEE  S  HHH:    
ExpBur          :----------eeeeeeeeeeeeeeeeeeeebebebeebbeebbeebeebeeeebbbbbeeeeeeebeebbbbbeeeeebeeeebeeeeebbebbeeeeeb:    
Contact         :                              bbb b                         bbbbbbbb                                

3j2t_G_1     201:LLMKLQNLCTRLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSLLILDDVWDSWVLKAFDSQCQILLTTRDKSVTDSVMGPKYVVPVESSLGKEKGLEI: 300
SecStr          :HHHHHHHHHHHT TT  S S   SSHHHHHHHHHHHHHHTS S EEEEEEE  HHHHTTT SS  EEEEES GGGGGGS S EEE        HHHHHHH:    
ExpBur          :beeebeebbeebbeeeeeeeeebeeeeebeeebeebeeeeeeeebebbbbbbeeebbeebeeeeebebbbbbebbbeebeeeeeebeeebebeeeebbeb:    
Contact         :                                                                                           b       b

3j2t_G_1     301:LSLFVNMKKADLPEQAHSIIKECKGSPLVVSLIGALLRDFPNRWEYYLKQLQNKQFKRIRKSSSYDYEALDEAMSISVEMLREDIKDYYTDLSILQKDVK: 400
SecStr          :HHHHH   GGGS HHHHHHHHHHTT HHHHHHHHHHHHHS S HHHHHHHHHHH TTTS    SSS S HHHHHHHHHHSS HHHHHHHHHGGGS SS  :    
ExpBur          :beeeeeeeeeebeeebeebbeeeebebeebeebbeebeeeeeebeebeeebeeebbeeeeeeeebeebbbeebbbbbbeebeeebeebbbbbbbbeeeee:    
Contact         :                          bb  b                                 bb                                  

3j2t_G_1     401:VPTKVLCILWDMETEEVEDILQEFVNKSLLFCDRNGKSFRYYLHDLQVDFLTEKNCSQLQDLHKKIITQFQRYHQPHTLSPDQEDCMYWYNFLAYHMASA: 500
SecStr          :B GGGGHHHHT  HHHHHHHHHHHHHTTSSEEEEETTEEEEE  HHHHHHHHHH  THHHHHHHHHHHHHHHH  TTT  TTSSSTTHHHHHHHHHHHHT:    
ExpBur          :bebebbbbbbeeeeeebbebbeebeeeebbeeeeeeeeeebebeeebbbbbeeebeeebeebbeebbebbeeeeebeebeeeeebbebbbebbbebbbeb:    

3j2t_G_1     501:KMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDCAVSENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLQAKQEVDNGMLY: 600
SecStr          :T HHHHHHHHS HHHHHHHHHHT HHHHHHHHHHGGGTS HHHHHHHHHHHHHTTS SSSTTSSS   HHHHGGGS SSSHHHHHHHHHHHHS       :    
ExpBur          :eeeeebbebbebbebbebbbeeeeebebebbbeebeeebeeebbebbeebeebbebbeebbeeebbbebebbbbebeeebebbeebbeeeeeeeeeeeeb:    

3j2t_G_1     601:LEWINKKNITNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHT: 700
SecStr          :EEETTTTTS    SEEE   SS EEEEEE TTSSEEEEEETTSSEEEEETTT  EEEEE   SS EEEEEE TTSSEEEEEETT  EEEEETTT  EEEE:    
ExpBur          :bebeebeebeeebeeeeebbeeebeebbbbeeeebbbbbbbeebbbbbeeebeeeebebebbeeebebbbbbeebeebbbbbebeebbbbebeebeeeee:    

3j2t_G_1     701:YDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKSINVKQFFLNLEDPQ: 800
SecStr          :E   SS EEEEEE SSSSS EEEEEETTS EEEEETTSSSEEEEE   SS EEEEEE SSTTEEEEEETTSEEEEEETTTTEEEEEEE        SSSS:    
ExpBur          :beebeeebebbebbeeeeeebbbbbbebeebbbbebeeeebeeebeebeeebeebebbeebebbbbbbebbbbbbbebeebeeeeebebeebeeeeeeee:    

3j2t_G_1     801:EDMEVIVKCCSWSADGARIMVAAKNKIFLFDIHTSGLLGEIHTGHHSTIQYCDFSPQNHLAVVALSQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDG: 900
SecStr          :SS    EEEEEE SSSSEEEEEETTEEEEEETTT  EEEEEE SSSS   EEEE SSTTEEEEEEETTEEEEEETTTTEEEEEE   SS EEEEEE SSS:    
ExpBur          :eeeebebebbbbbeebbebbbbbbbbbbbbbbeeeeeebebebbeeeebeebbebeeeebbbbbbeeeebbbbebeeeeeebebebbeeebebbbbbeeb:    

3j2t_G_1     901:SSFLTSSDDQTIRLWETKKVCKNSAVMLKQEVDVVFQENEVMVLAVDHIRRLQLINGRTGQIDYLTEAQVSCCCLSPHLQYIAFGDENGAIEILELVNNR:1000
SecStr          :SEEEEEETT  EEEEEHHHHTS   SS  S EEEEEETTEEEEEEE SSSSEEEEETTS  EEEE  S  SEEEE TTSSEEEEE TTS  EEEESSSTT:    
ExpBur          :ebbbbbbeeebbbbbebeebeeeeeebeeeeeebeeeeeebbbebebeeebbeeebbeeeeeeeeeeeebeeebebeeeebbbbbeeebbbebeeeeeee:    

3j2t_G_1    1001:IFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIFLRGHQETVKDFRLLKNSRLLSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDIS:1100
SecStr          : EEE    SS    EEE SSSS EEE  SSSEEEEEETTTTEEEEEE   S EEEEEE SSSEEEEEESSSEEEEEESSS    EEEE  SS     EE :    
ExpBur          :eeeeeeebeeebeebebbeeeebbbbbbeeeebbbbebeeeeeeebebeeebbeebeebeeeebbbbbeebbbbbbebeeeeeebebebbeeebeebbbb:    

3j2t_G_1    1101:HDATKFSSTSADKTAKIWSFDLLLPLHELRGHNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGKMLIS:1200
SecStr          :SSTTS EE   SB EEEE SSSSS SEEE   SS B EEEE SSSSEEEEE TT  EEEEE SS            TTT    S  SEEEE TTSSEEEE:    
ExpBur          :eeebeebbbbbeebbbbbbbeeeeeeeebeebeeebeebebbeeeebbbbbbeebbbbbbeeeeeeeeeebebeebeeebbbeeebeebebbeeeebbbb:    

3j2t_G_1    1201:AGGYIKWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILQTLE----------------------------------------------:1254
SecStr          :ESSS EEEESSS B       SSSS   EEE TTSSEEEEE TT  EEEEEE -:    
ExpBur          :bbbbbbbbebeeeeebebbebebeebeebeebeeeeebbbbbbebbbbbbeee-:    


Input Residue Numbers for Focused Sites

ex) 2,15,123