#WARNING:no index is registered index "YP_009725310.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725310.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | D 1 (B) | polymer(polypeptide(L)) [346 aa] | Non-structural protein 15 :R1AB_SARS2 | |
2 | b | G 1 (G) | polymer(polyribonucleotide) | RNA (35-MER) | 12K 18Q 145E 146G 147S (identity: 100.0 %/99.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8ud3_D_1 identity=99.7% |
queryA 1:SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIG: 100 :****************************************************************************************************: 8ud3_D_1 14:SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPAHISTIG: 113 SecStr : HHHHHHHHHHHSS EEEETTEEEEEETTEEEEEEE SSS HHHHHHHHHTB S B HHHHHHTT EEBSSB EETTTTEESSS EES: ExpBur :eeebbbbbbeeeebeeeeeeebebeeeeebbebeeeeeeeebbebebeeebebbbbbbbebbeebbbbbbbbeebebebbbebbbbbeeeebbbbeebbe: Contact : b b queryA 101:VCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNL: 200 :****************************************************************************************************: 8ud3_D_1 114:VCSMTDIAKKPTETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNL: 213 SecStr :S TTTEEESSTTSGGGSSS EEEETTSTTHHHHHHH SSEEEEESS TT EE SEEEETTEEEE SSS EEEEEETTEEE B B S: ExpBur :bbeebeebeebeeeebeeebbbbbebeeebbeebeebebbbbbbeeebeebeebebbebbbbeeeeeeeeeeebebbbbbbeeeeeeebeebebbbbbeb: Contact : bbb queryA 201:QEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLD: 300 :********************************* ******************************************************************: 8ud3_D_1 214:QEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEAIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLD: 313 SecStr :TT SHHHHHHHHS HHHHHHHTT TTTTHHHHTS B SSSB B BHHHHHHHHHHS EEE SS S SEEEEEEE TTT EEEEEEEE B HH: ExpBur :eebeeebebbebbbebeeeebbeeeebeeebbeebbbbebeeeebebbbbbbbbbebeeebebeeeeeeeebebbbbbebebeeeebebeebbbbbbbbe: queryA 301:DFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQ: 346 :**********************************************: 8ud3_D_1 314:DFVEIIKSQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQ: 359 SecStr :HHHHHHHSS S SEEEEEEEETTEEEEEEEEEETTEEEEEEETT : ExpBur :ebbebbeebebeeeeeebebbbbbeebbbbbebeeeebeebebeee: |