Protein Model on 4du4_A_1_D_1 (TEMPLATE: 4du4 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query F)
1 a FA 1 (A) polymer(polypeptide(L)) [902 aa] DNA polymerase :DPOL_BPR69
2 b D 1 (A) non-polymer(DTP) 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE 411D 412L 413T 414S 415L 416Y 417P 482R 560K 561L 564N 567Y 622T 623D
FOCUSED TEMPLATE
MODEL[1] TEMPLATE:4du4_A_1
4du4_A_1       1:MKEFYLTVEQIGDSIFERYIDSNGRERTREVEYKPSLFAHCPESQATKYFDIYGKPCTRKLFANMRDASQWIKRMEDIGLEALGMDDFKLAYLSDTYNYE: 100
SecStr          :   EEEEEEEETTEEEEEEE TTS EEEEEE    EEEEE  TTS  SEEETTS EEEEEE SSHHHHHHHHHHHHHHT   BS  SHHHHHHHHHT S :    
ExpBur          :eeebbbbbbeeeebbbbbbbbeebeeeeeeeebebebbbebeeeeeeebebbeeebbeeeebeebeebeebbeebeeeeeebbbbebbbbbbbbeebeee:    

4du4_A_1     101:IKYDHTKIRVANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDDRFYVFDLLNSPYGNVEEWSIEIAAKLQEQGGDEVPSEIIDKIIYMPFDNEKELLME: 200
SecStr          :    GGGS EEEEEEE   TTSS  TTT  S   EEEEEETTTTEEEEEEE EETTEE     HHHHHS GGGTS    HHHHTTEEEEEESSHHHHHHH:    
ExpBur          :bebeeeebbbbbbebbbbbeeeebebeebebbbbbbbbbbeeeeebbbbbbbebeeeebeebeeeebeeeeeeebbebeeebbeebeebebeebeebbee:    

4du4_A_1     201:YLNFWQQKTPVILTGWNVESFAIPYVYNRIKNIFGESTAKRLSPHRKTRVKVIENMYGSREIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNV: 300
SecStr          :HHHHHHHT  SEEE SSTTTTHHHHHHHHHHHHH HHHHGGGSTTS EEEEEEESSS EEEEEEETT EE  HHHHHHHHS    S   HHHHHHHHH  :    
ExpBur          :bbebbeebbbbbbbbbebeebbbbbbbbbbeeeeeeeebeebbebeebeeeeeeeeeeeebbbebbbbbbbbbbebbeebbeeebbbbebebbbeebbee:    

4du4_A_1     301:GKLKYDGPISKLRESNHQRYISYNIIAVYRVLQIDAKRQFINLSLDMGYYAKIQIQSVFSPIKTWDAIIFNSLKEQNKVIPQGRSHPVQPYPGAFVKEPI: 400
SecStr          :     SS GGGHHHH HHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHTS GGGGG HHHHHHHHHHHHHHTTTEE                B    :    
ExpBur          :eebeeeeeebebbeeebbbbbbbbbbbbbbbeebeebbebbebbbebbbebbbbbebbeeeeebbbbbbbbbbeeeeebbbeeeeeeeeeeeeeebeebe:    

4du4_A_1     401:PNRYKYVMSFDLTSLYPSIIRQVNISPETIAGTFKVAPLHDYINAVAERPSDVYSCSPNGMMYYKDRDGVVPTEITKVFNQRKEHKGYMLAAQRNGEIIK: 500
SecStr          : EE SSEEEEEETTHHHHHHHHHT  TT EEEE     HHHHHTT S  S SSSEE TTSEEE SSS  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eeebebbbbbbbebbbbbbbbbbbbbbbbbeeebeeeeeeebbeeebeebbeeebbbbebbbbeeeeebbbbebbeebbeebeeebebbbbbbebbbebe:    
Contact         :          bbbbbbb                                                                b                  

4du4_A_1     501:EALHNPNLSVDEPLDVDYRFDFSDEIKEKIKKLSAKSLNEMLFRAQRTEVAGMTAQINRKLLINSLYGALGNVWFRYYDLRNATAITTFGQMALQWIERK: 600
SecStr          :HHTTS  SS        TTS   HHHHHHHTT  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTSTT  HHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebeeeeeeeeeeebebebeeebeeeeeeebeebbeebbeebbeebeeeeebbebbbbbbeebbeebbebbeebebbbbbbebbbbbbbbbbbbbbbbbbb:    
Contact         :                                                           bb  b  b                                 

4du4_A_1     601:VNEYLNEVCGTEGEAFVLYGDTDSIYVSADKIIDKVGESKFRDTNHWVDFLDKFARERMEPAIDRGFREMCEYMNNKQHLMFMDREAIAGPPLGSKGIGG: 700
SecStr          :HHHHHHHHTT  S   EEEEETTEEEEE HHHHHHH GGG SSHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTT SS    EEEEEEE   TTS    E:    
ExpBur          :bbebbbeebeeeeeebbbbbbeebbbbbbeebbeeeeeeebeebeebbeebbebbeeebbebbeebbeebbebbbbeebbbebebbbbbbbeeeeebbbb:    
Contact         :                     bb                                                                             

4du4_A_1     701:FWTGKKRYALNVWDMEGTRYAEPKLKIMGLETQKSSTPKAVQKALKECIRRMLQEGEESLQEYFKEFEKEFRQLNYISIASVSSANNIAKYDVGGFPGPK: 800
SecStr          :EEEETTEEEEEEEEETTEEEEEEEEEEESSGGG TTS HHHHHHHHHHHHHHHHT HHHHHHHHHHHHHHGGGS GGGG EEEE  SSGGGEETTEE TT:    
ExpBur          :bbebeeebbbbbbbbeebebbeeebebeebbbeebebbebbbebbeebbebbbbebeebbbeebeebeeebeeeebbebbebeebeebeebeeeeeebee:    

4du4_A_1     801:CPFHIRGILTYNRAIKGNIDAPQVVEGEKVYVLPLREGNPFGDKCIAWPSGTEITDLIKDDVLHWMDYTVLLEKTFIKPLEGFTSAAKLDYEKKASLFDM: 900
SecStr          :  HHHHHHHHHHHHTTT SSS    TTSEEEEEEB TT TTSSSEEEEETTS   HHHHHHHHHHB HHHHHHHHTHHHHHHHHHHTT  SS    GGGG:    
ExpBur          :beeebebbbbbeeebeebeebeebeeeebbbbbbbeeebebebebbbbbbeeebbeebeeebeeebbbeebbeebbbebbeebbebbebebeeeeeeeee:    

4du4_A_1     901:FD--------------------------------------------------------------------------------------------------: 902
SecStr          : -:    
ExpBur          :e-:    


Input Residue Numbers for Focused Sites

ex) 2,15,123