[pdbjlvh2]Protein Model on 3nae_A_1_D

Protein Model on 3nae_A_1_D_1 (TEMPLATE: 3nae )

CurrentView:HTML5 Change to:[JAVA]

DOWNLOAD:

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query F)
1	a	F	A 1 (A)	polymer(polypeptide(L)) [903 aa]	DNA polymerase :DPOL_BPR69
2	b		D 1 (A)	non-polymer(DTP)	2'-DEOXYADENOSINE 5'-TRIPHOSPHATE	411D 412L 413T 414S 415L 416Y 417P 482R 486K 560K 561L 564N 622T 623D

FOCUSED TEMPLATE

MODEL[1] TEMPLATE:3nae_A_1

3nae_A_1       1:MKEFYLTVEQIGDSIFERYIDSNGRERTREVEYKPSLFAHCPESQATKYFDIYGKPCTRKLFANMRDASQWIKRMEDIGLEALGMDDFKLAYLSDTYNYE: 100
SecStr          :   EEEEEEEETTEEEEEEE TTS EEEEEE    EEEEE  TTS  SEEETTS EEEEEE SSHHHHHHHHHHHHHHT   BS  SHHHHHHHHH  S :    
ExpBur          :eeebbbbbbeeeebbbbbbbbeebeeeeeeeebebebbbebeeeeeeebebbeeebbeeeebeebeebeebbeebeeeeebbbbbebbbbbbbbeebeee:    

3nae_A_1     101:IKYDHTKIRVANFDIEVTSPDGFPEPSQAKHPIDAITHYDSIDDRFYVFDLLNSPYGNVEEWSIEIAAKLQEQGGDEVPSEIIDKIIYMPFDNEKELLME: 200
SecStr          :    GGGS EEEEEEEE  TTSS  TTT  S EEEEEEEETTTTEEEEEEE EETTEE     HHHHHS GGGT     HHHHTTEEEEEESSHHHHHHH:    
ExpBur          :beeeeeebbbbbbbbbbbbeeeebebeebebbbbbbbbbbeeeeebbbbbbbebeeeebeebeeeebeeeeeeebbebeeebbeebeeeebeebeebbee:    

3nae_A_1     201:YLNFWQQKTPVILTGWNVESFAIPYVYNRIKNIFGESTAKRLSPHRKTRVKVIENMYGSREIITLFGISVLDYIDLYKKFSFTNQPSYSLDYISEFELNV: 300
SecStr          :HHHHHHHT  SEEE SSTTTTHHHHHHHHHHHHH HHHHGGGSTTS EEEEEEEETTEEEEEEEETT EE  HHHHHHHHS    S   HHHHHHHHH  :    
ExpBur          :bbebbeeebbbbbbbbebeebbbbbbbbbbeeeeeeebbeebbebeebeeeeeeeeeeeeebbebbbbbbbbbbbbbeebbeeebbbbebebbbeebbee:    

3nae_A_1     301:GKLKYDGPISKLRESNHQRYISYNIIAVYRVLQIDAKRQFINLSLDMGYYAKIQIQSVFSPIKTWDAIIFNSLKEQNKVIPQGRSHPVQPYPGAFVKEPI: 400
SecStr          :     SS GGGHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHTS GGGGG HHHHHHHHHHHHHHTTTEE                B    :    
ExpBur          :eebeeeeeeeebbeeebbbbbbbbbbbbbbbbebeebbebbebbbebbbebbbbbebbeeeeebbbbbbbbbbeeeeebbbeeeeeeeeeeeeeebeebe:    

3nae_A_1     401:PNRYKYVMSFDLTSLYPSIIRQVNISPETIAGTFKVAPLHDYINAVAERPSDVYSCSPNGMMYYKDRDGVVPTEITKVFNQRKEHKGYMLAAQRNGEIIK: 500
SecStr          : EE SSEEEEEETTHHHHHHHHHT  GGGEEEE      - TTTT S  S SSSEE TTSEEE SSS  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eeebebbbbbebebbebbbbbbbbbbbbbbeeebeeeee-ebbeeebeebbeeebbbbebbbbeeeeebbbbebbeebbeebeeeeebbbbbbebbbebe:    
Contact         :          bbbbbbb                                                                b   b              

3nae_A_1     501:EALHNPNLSVDEPLDVDYRFDFSDEIKEKIKKLSAKSLNEMLFRAQRTEVAGMTAQINRKLLINSLAGALGNVWFRYYDLRNATAITTFGQMALQWIERK: 600
SecStr          :HHTTS  SS        TTS   HHHHHHHTT  HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT TTSTT  HHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :ebeeeeeeeeeeebebebeeebeeeeeeebeebbeebbeebbeebeeeeebbebbbbbbeebbeebbebbeebebbbbbbebbbbbbbbbebbbbbbbbb:    
Contact         :                                                           bb  b                                    

3nae_A_1     601:VNEYLNEVCGTEGEAFVLYGDTDSIYVSADKIIDKVGESKFRDTNHWVDFLDKFARERMEPAIDRGFREMCEYMNNKQHLMFMDREAIAGPPLGSKGIGG: 700
SecStr          :HHHHHHHHHT SS   EEEEBSSEEEEE HHHHHHH GGG SSHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTT SS    EEEEEEE   TTS    E:    
ExpBur          :bbebbbeebeeeeeebbbbbbebbbbbebeebbeeeeeeebeebeebbeebbebbeeebbebbeebbeebbebbbbeeebbebebbbbbbbeeeeebbbb:    
Contact         :                     bb                                                                             

3nae_A_1     701:FWTGKKRYALNVWDMEGTRYAEPKLKIMGLETQKSSTPKAVQKALKECIRRMLQEGEESLQEYFKEFEKEFRQLNYISIASVSSANNIAKYDVGGFPGPK: 800
SecStr          :EEEETTEEEEEEEEETTEEEEEEEEEEESSGGG TTS HHHHHHHHHHHHHHHHT HHHHHHHHHHHHHHGGGS GGGG EEEE   TTTTEETTEE TT:    
ExpBur          :bbebeeebbbbbbbbeebebbeeebebeebbbeebebbebbbebbeebbebbbbebeebbbeebeebeeebeeeebbebbebeebebbeeeeeeeeebee:    

3nae_A_1     801:CPFHIRGILTYNRAIKGNIDAPQVVEGEKVYVLPLREGNPFGDKCIAWPSGTEITDLIKDDVLHWMDYTVLLEKTFIKPLEGFTSAAKLDYEKKASLFDM: 900
SecStr          :  HHHHHHHHHHHHSTT TTS    TTSEEEEEEB TT TT SSEEEEETTS   TTTHHHHHHHB HHHHHHHHTHHHHHHHHHHTT  SS    TTTT:    
ExpBur          :beeebebbbbbeeebeeeeebeebeeeebbbbbbbeeebebebebbbbbbeeebbeebeeebeeebbbeebbeebbbebbeebbebbebebeeeeeeeee:    

3nae_A_1     901:FDF-------------------------------------------------------------------------------------------------: 903
SecStr          :S -:    
ExpBur          :ee-:

Protein Model on 3nae_A_1_D_1 (TEMPLATE: 3nae )

Input Residue Numbers for Focused Sites