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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(ITAL_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [578 aa] | Integrin alpha-L :ITAL_HUMAN | |
2 | b | T 1 (C) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 89N 128L 142Q 144R (identity: 100.0 %/97.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5e6s_C_1 identity=97.8% |
queryA 26:YNLDVRGARSFSPPRAGRHFGYRVLQVGNGVIVGAPGEGNSTGSLYQCQSGTGHCLPVTLRGSNYTSKYLGMTLATDPTDGSILACDPGLSRTCDQNTYL: 125 :****************************************************************************************************: 5e6s_C_1 1:YNLDVRGARSFSPPRAGRHFGYRVLQVGNGVIVGAPGEGNSTGSLYQCQSGTGHCLPVTLRGSNYTSKYLGMTLATDPTDGSILACDPGLSRTCDQNTYL: 100 SecStr : EEEEEEEEE TT TTTTSEEEEETTEEEEEE TT EEEEEETTT EEE TT TTTTSEEEE TTT EEEEEEEEEEEETTEEEE: ExpBur :ebbeeeeeeebebeeeeeebbeebbbbeebbbbbbbbeeeeebebbbbebeeeebeebebeeeeeebeebbbbbbbbeeeebbbbbbbbbebebeeeebb: Contact : b queryA 126:SGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKRKDPDALLKHVK: 225 :**************************************************************************************** ***********: 5e6s_C_1 101:SGLCYLFRQNLQGPMLQGRPGFQECIKGNVDLVFLFDGSMSLQPDEFQKILDFMKDVMKKLSNTSYQFAAVQFSTSYKTEFDFSDYVKWKDPDALLKHVK: 200 SecStr :EEEEEEESS TTS EEEE TT SSEEEEEEEE BTTS HHHHHHHHHHHHHHHHHTTTSS EEEEEEESSSEEEEE HHHHHHH HHHHTTT : ExpBur :bbbbbbbeeebebebeebebbbeeeeeeebbbbbbbbbbeebeeeebebbbebbbebbeebeeeebbbbbbbbbeeeeebbbbeebeeeeebeebbeebe: Contact : b b b queryA 226:HMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFT: 325 :****************************************************************************************************: 5e6s_C_1 201:HMLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNIDAAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLFT: 300 SecStr : B HHHHHHHHHHHTS GGGT TTSEEEEEEEESS SS GGGTTSEEEEEEESGGG SHHHHHTTGGGS S HHHHEEEESSGGGHHHHHH: ExpBur :eeeeebbbbbbbeebbeebbeeeeebeeebbebbbbbbbbeeeeeeebeebeebbbbbbbbbeebeeeebeebbeebbbebbeebbbebeebeebeebee: queryA 326:ELQKKIYVIEGTSKQDLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTWLPSRQKTSLLASGAP: 425 :**** ************************************************************************************: 5e6s_C_1 301:ELQKXXXXXXXXXXXXLTSFNMELSSSGISADLSRGHAVVGAVGAKDWAGGFLDLKADLQDDTFIGNEPLTPEVRAGYLGYTVTWLPSRQKTSLLASGAP: 400 SecStr :HHH ------------ S SSTT EEEEEEEETTEEEEEETTHHHHTBEEEEE TTSS EEEEE SS STTTT BTSEEEEE BSSS EEEEEET: ExpBur :ebbe------------eeebebbbbbbbebbebbeeebbbbbbbbebebbbbbebeeebebbeebbbeeeeeebeebebbebbbbbebeeeebbbbbbbb: queryA 426:RYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAI: 525 :****************************************************************************************************: 5e6s_C_1 401:RYQHMGRVLLFQEPQGGGHWSQVQTIHGTQIGSYFGGELCGVDVDQDGETELLLIGAPLFYGEQRGGRVFIYQRRQLGFEEVSELQGDPGYPLGRFGEAI: 500 SecStr :TGGGT EEEEEE TT EEEEEEE STTS TTSEEEEE TT SSB EEEEEETT TTB EEEEEEE SSSEEEEEE SSBTT TTSEE: ExpBur :ebeeebbbbbbebeeeeeebeeeeebebeeeebebbbebbebbbeeebbbbbbbbbbbebeeeebbbbbbbbebeeeebeeeebbebeeebeebebbebb: queryA 526:TALTDINGDGLVDVAVGAPLEEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPV: 615 :******************************************************************************************: 5e6s_C_1 501:TALTDINGDGLVDVAVGAPLEEQGAVYIFNGRHGGLSPQPSQRIEGTQVLSGIQWFGRSIHGVKDLEGDGLADVAVGAESQMIVLSSRPV: 590 SecStr :EE SSSSS EEEEETTSTTBEEEEE EETTEE SS SEEEEHHHH SS BTSEEE S SSSSS EEEEEETTEEEEEEE : ExpBur :bebeebbeeebbbbbbbbbebeebbbbbbbbeeebbeeeeebebebeebeeebebbbbbbbbeebbeeeeebbbbbbbbbebbbbebeee: |