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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [848 aa] | Leucyl-cystinyl aminopeptidase :LCAP_HUMAN | |
2 | b | R 1 (B) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 134G 185E(N) (identity: 50.0 %/35.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4p8q_B_1 identity=35.7% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEY--LVVHLKG: 168 :* *** * * * * ** * ** * * ** ** ** * * : 4p8q_B_1 10:WAQIRLPTAVVPLRYELSLHPNLTS-----MTFRGSVTISVQALQVTWNIILHST--------GHNISRVTFMXXXXXXEKQAEILEYAYHGQIAIVAPE: 96 SecStr : SS SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS EEEEEEE --------S EEEEEEE ------ EE EEEEETTTTEEEEEEEE: ExpBur :eeeebbbebbebeebebebebebee-----eebebebebbbebeeebeebbbbbe--------ebeeebbbbe------eeebeeeeeeebbbbbbebee: Contact : b queryA 169:SLVKDSQYEMDSEFEGELADDLAGFYRSEYM-EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVT: 267 : * * * *** * * * * * ** ** ******** ** * * * ****** ** * * * : 4p8q_B_1 97:ALLAGHNYTLKIEYSANISSSYYGFYGFSYTDESNEKKYFAATQFEPLAARSAFPCFDEPAFKATFIIKIIRDEQYTALSNM-PKKSSVVL--DDGLVQD: 193 SecStr :EE TT EEEEEEEEEEE BSSSSSSEEEEEE TT EEEEEE TTTTHHHHS B TT BEEEEEEEE TTSEEEESS- EEEEEE --TTS EEE: ExpBur :ebeeeeebebbbebebebeeeeebbbbbebeeeeeeeeebbbbbbbbebbbebbbbbbbbebbbbbbbbbbbbeebebbbbb-eeeeeeee--eeeebeb: Contact : b queryA 268:EFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSL: 367 :** ****** **** * * ** * * * * * * *** * * ** *** * * *** ********* * ** *: 4p8q_B_1 194:EFSESVKMSTYLVAFIVGEMKNL-SQDVNGTLVSIYAVPEKIGQVH--YALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREETL: 290 SecStr :EE SB GGG EEEE EEE-EEE SS EEEEEE GGG SSTH--HHHHHHHHHHHHHHHHS S SSEEEEEEESSTT TTEEEEEGGGG: ExpBur :ebeebeebbbbbbbbbbbebeeb-eeeeeebebbbbbbeebbeebe--bbbebbbebbebbbebbeeebebebbbbbbbbbeebbebbbbbbbbbeeebb: queryA 368:LFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDV----YRVMAVDALASSHPLSTPASEIN: 463 :* * ** * *************** ************ ** * * * * * * **** * * : 4p8q_B_1 291:LYDSNTSSMADRKLVTKIIAHELAHQWFGNLVTMKWWNDLWLNEGFATFMEYFSLEKI-----FKELSSYEDFLDARFKTMKKDSLNSSHPIS---SSVQ: 382 SecStr : TTT HHHHHHHHHHHHHHHHTTTBTTTBEESSGGGHHHHHHHHHHHHHHHHHHH-----SGGG THHHHHHHHHHHHHHHHSTT S --- : ExpBur :bbeeeebbbeeebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeee-----beebbbebbbbebbbebbeebbbeebeebe---eebe: queryA 464:TPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTL--: 561 : ** * ** ** ** * * ** ****** *** * *** * * * * **** *** ** * : 4p8q_B_1 383:SSEQIEEMFDSLSYFKGSSLLLMLKTYLSEDVFQHAVVLYLHNHSYASIQSDDLWDSFNEVXNQ-----TLDVKRMMKTWTLQKGFPLVTVQKKGKELFI: 477 SecStr :SHHHHHGGG HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTTT EE THHHHHHHH - ----- S TTHHHHHHHSSS EEEEEEEETTEEEE: ExpBur :eeeebeebeeebbbbbbbbbbbbbbeebeeeebeebbbebbeebeeeebebeebbebbbee-ee-----eeeebbbbebbbeebbbbbbbbeeeeeebeb: queryA 562:SQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV--RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRA: 659 : ** * * * * * * * ** * * *** * * * ** **: 4p8q_B_1 478:QQERFFLNXXXXXXXXXT-SYLWHIPLSYVTEXXNYSKYQSVSLLDKKSGVINLTEEVLWVKVNINMNGYYIVHYADDDWEALIHQLKINPYVLSDKDRA: 576 SecStr :EEEE --------- - EE EEE -- EEE EE SSEEEEE SS S EEESGGG SS EEEE HHHHHHHHHHHHH STTS HHHHH: ExpBur :ebebbebe---------e-eeebebbbbbbbb--eeeeeeeeeebeeeeeebebeeebebbbbbbebbbbbbbbbeeebbebbbebbeeebeebebebbb: queryA 660:QIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNN----------TNNWREIPENLMD: 749 : ** * ** *** * * * * ** * * * * ** * * * ** * : 4p8q_B_1 577:NLINNIFELAGLGKVPLKRAFDLINYLGNENHTAPITEALFQTD---LIYNLLEKLGYM-DLASRLVTRVFKLLQNQIQQQTWTDEGTPSMRELRSALLE: 672 SecStr :HHHHHHHHHHHHTSS HHHHHHHGGGGGG SHHHHHHHHHHHH---HHHHHHHHTT H-HHHHHHHHHHHHHHHHHHHH SS S HHHHHHHHHHHH: ExpBur :bbbbbbbbbbbeeebebebbbebbebbeebeebbbbebbbebbe---bbbbbbbbeeee-ebbeebbeebbebbeebbeebebeeeeebbebebbbebbe: queryA 750:QYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTL: 849 : ** * ** ** ** * * * * *** * * *: 4p8q_B_1 673:---------FACTHNLGNCSTTAMKLFDDWMASNGTQSLPTDVMTTVF--KVGAKTDKGWSFLLGKYISIGSEAEKNKILEALASSEDVRKLYWLMKSSL: 761 SecStr :---------HHHHTT TTHHHHHHHHHHHHHHTTT S GGGHHHHH--HHHTTSHHHHHHHHHHHTT S HHHHHHHHHHHTT S HHHHHHHHHHHH: ExpBur :---------bbbebebeebbeebeeebeebbeeeeeeebebbbbbbbb--bbbbeeeebbebbbebbeeeeebeebebbbebbbbbeeeebbeebbebbb: queryA 850:NPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIK: 949 :* * * * * * * **** ** ** ** * * *** * * * * * *** ** : 4p8q_B_1 762:NGDNFRTQKLSFIIRTVGRHFPGHLLAWDFVKENWNKLVQKFPLGSYTIQNIVAGSTYLFSTKTHLSEVQAFFENQSEATF--RLRCVQEALEVIQLNIQ: 859 SecStr :HTSSS GGGHHHHHHHHTTSTTTHHHHHHHHHHTHHHHHHHS TT HHHHHHHHHHHTT SHHHHHHHHHHHHTT HHHH--SSHHHHHHHHHHHHHHH: ExpBur :eeeebebbbbbbbbebbbeeeebbeebbebbeeebeebeeebeeeeebbeebbebbbebbbeeebbeebeebbeeeeeebb--eeebbebbbbebeebbe: queryA 950:WVKENKEVVLQWF: 962 :* * * : 4p8q_B_1 860:WMEKNLKSLTWWL: 872 SecStr :HHHHHHHHHTTT : ExpBur :bbeebbeebeebb: |