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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [879 aa] | ENDOPLASMIC RETICULUM AMINOPEPTIDASE 2 :ERAP2_HUMAN | |
2 | b | N 1 (N) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 232E(N) 271T 272T 273P(V) 274K 509Y (identity: 66.7 %/36.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5ab2_B_1 identity=36.6% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLS--QGHRVVLRG--VGGSQPPDIDKTELVEPTEYLV: 163 :* *** * * * ** * * * ** ** *** * * ** * * * * * * * : 5ab2_B_1 64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157 SecStr : SSS SS EEEEEEEEEEEETTTTE-----EEEEEEEEEE SS S EEEE SS EEEEEEEEESS SSS SS B EEEEETTTTEEEEE S-S : ExpBur :eeeeebbeebebebbebbbebebeeee-----bebebebebebeeeeeebbbbbeebeeeebebebeebeebeeeeeebeebebeebbbbbbebe-eebe: queryA 164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259 : *** * * * * *** * * * * * ** ******* ** * * ***** ** * : 5ab2_B_1 158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248 SecStr :TTS --------EEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B SSSS BEEEEEEEE TT EEEESS- EEEE SSS : ExpBur :eeee--------bebebebebebeeebbbbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbebebeeebebbbbb-beeeeeeeeeee: Contact : b queryA 260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358 : ** * ** ****** * ** * * ** * * * * *** * * * *** * * * *** *******: 5ab2_B_1 249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340 SecStr :EEE------EE SB GGG EEEE EEEEEE SSS EEEEEE GGGGGGGH--HHHHHHHHHHHHHHHTTS SSEEEEEEESS SSSEE TT: ExpBur :bbb------bbeebeebbbbbbbbbbbbbeebebeeeeebebbbbbbbebeebbe--bbbebbbebbebbbebbebebebebbbbbbbbbbbeebbbbbb: Contact : bbbb queryA 359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458 :* **** ****** ** * * * **************** ***** ** **** * * * * ** * * * ** * * *: 5ab2_B_1 341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLKEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439 SecStr :EEEEEGGGT TTT HHHHHHHHHHHHHHHHHHHTTTTEEESSTTSTHHHHHHHHHHHHHHHHHH GGG TTTH-HHHHHHHHHHHSSTT TT : ExpBur :bbbbbbebbbbeeebbbbeeebebbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbbebbbebbee: queryA 459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRD: 538 :* ** ** * ** ** *** * ** ** * * * ** * * * ** * * : 5ab2_B_1 440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVKE: 536 SecStr : --- SHHHHHTT SHHHHHHHHHHHHHHHHTTHHHHHHHHTHHHHTTSTTEEE TGGGTTTTS ----------------------------- GG: ExpBur :b---eeeeebbbbbbebbebbbbbbbbbbbeebeeeebeebbbebbeebeeebbebeebbebbeee-----------------------------eebee: Contact : b queryA 539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFLL-----DPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYR: 631 : * **** * * * * * ** ** ** * * * * * * ** * *** : 5ab2_B_1 537:MMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPE---WRALQERYLWHIPLTYSTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYI: 632 SecStr :GGGGTTTS EEEEEESSTTS EEEEEE SS SSS SS---TTSS S EE TTT S EE SSS - S S BSGGG SS E: ExpBur :bbebbbeeebbbbbbbeeeeeeeebebbbbbbebeeeeee---beeebeebebebbbbbbbeeeeeeeeeebeeee-eeeeeeeebebbbbbbbbebbbb: queryA 632:VNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTP: 728 :* * * *** * * * * * * * ** * * * ** * * * ** * * ** *: 5ab2_B_1 633:VHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKP: 732 SecStr :EEE SSS S HHHHHSS SSS HHHHHHHHHHHHHHTTTTSS HHHHHTGGG TTS HHHHHHHHHHHHHHHHHHHTTT HHHHHHHHHHHHHSSHH: ExpBur :bbbeeeebeebbebbeeebeebeebbbbbbbbbbbbbbbbeebebeebbebbebbeebebbbbbebbbebbeebbebbebeebeebbebbbebbbebbee: queryA 729:LFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKL: 828 : * * ** * ** **** * ** * ** * * : 5ab2_B_1 733:VI-----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKI: 824 SecStr :HH-----HT SS - S HHHHHHHHHHHHHHHTTT HHHHHHHHHHHHHHHTTTT S GGGHHHHH--HHTTSSTTTHHHHHHHHHT S HHHHHHH: ExpBur :bb-----eeeebbe-eeebbebbbbeebbbbbbbbebeebeeebeebbeebeeeebeeebbbbbbebbb--bbbbeeeebbebbbeebeebbbbbbbebb: queryA 829:RAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEET: 928 : ** ** * * * * ** * **** ** * ** * * ** ** * * : 5ab2_B_1 825:LYALSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ: 924 SecStr :HHHTTS S TTHHHHHHHHHHHTSSS GGGHHHHHHHHTTSTTTHHHHHHHHHHTHHHHHHHS TT HHHHHHHHHHHTT TTTHHHHHHHHHHHHHS: ExpBur :bbbbbbbeeeeebeebbebbbeeeebebbbbbebbebbbeeeebbebbbebbeeebeebeeebebbbebbbebbebbbebbbbeebbeebeebbeebeee: queryA 929:GFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967 : ** ** **** * * * : 5ab2_B_1 925:--GSHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 961 SecStr :--S HHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH -: ExpBur :--beebebbebbbebbebbbeebeebeeebeebbeeee-: |