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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [877 aa] | Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN | |
2 | b | H 1 (H) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 90R(H) 92Y(N) 95P(S) 239H(R) 240P(E) (identity: 0.0 %/36.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7nsk_B_1 identity=36.8% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLS--QGHRVVLRG--VGGSQPPDIDKTELVEPTEYLV: 163 :* *** * * * ** * * * ** ** *** * * ** * * * * * * * : 7nsk_B_1 64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157 SecStr : SSS SSEEEEEEEEEEEEETTTTE-----EEEEEEEEEEESS SEEEEE S EEEEEEEE SSSGGG TT EE EEEETTTTEEEEE S-S : ExpBur :eeeeebbebbebebbebebebebeeee-----bebebebebebeeeeebbbbbbeebebeebebebeebeebeeeebebeebebeebbbbbbebe-eebe: Contact : b b b queryA 164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259 : *** * * * * *** * * * * * ** ******* ** * * ***** ** * : 7nsk_B_1 158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248 SecStr :TTEE--------EEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTT GGGTS B STTS BEEEEEEEE TT EEEESS- EEEEEE TTS : ExpBur :eeee--------bebebebeeebeebbbbbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbbbebeeebebbbbb-beeeeeeeeeee: Contact : bb b queryA 260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358 : ** * ** ****** * ** * * ** * * * * *** * * * *** * * * *** *******: 7nsk_B_1 249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340 SecStr :EEE------EE SB GGG EEEE EEEEEE TTS EEEEEE GGGGGGGH--HHHHHHHHHHHHHHHHTT SSSEEEEEEESS SSEE TT: ExpBur :bbb------ebeebeebbbbbbbbbbbbbeebebebeeebebbbbbbeebeebbe--bbbebbeebbebbbebbebebebebbbbbbbbbbbeebbbbbb: queryA 359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458 :* **** ****** ** * * * **************** ***** ******* * * * * ** * * * ** * * *: 7nsk_B_1 341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439 SecStr :EEEEEGGGT TTT HHHHHHHHHHHHHHHHHTTBTTTBEESSGGGTHHHHHHHHHHHHHHHHTT GGG HHHHH-HHHHHHHHHHHTSTT SS : ExpBur :bbbbbbbbbbbeeebbbeeeebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbbebbbbbbee: queryA 459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRD: 538 :* ** ** * ** ** *** * ** ** * * * ** * * * ** * * : 7nsk_B_1 440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCXXXXXXXXXXXXXXXXXXXXXXXXXXXNAEVKE: 536 SecStr : --- SHHHHHHTSSHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSEE HHHHHHHHH --------------------------- THHHH: ExpBur :b---eeeeebbbbbbebbebbbbbbbbbbeeeeeeebbeebbbebbeebeeebbebebbbbbbeebe---------------------------eeebee: queryA 539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFLL-----DPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYR: 631 : * **** * * * * * ** ** ** * * * * * * ** * *** : 7nsk_B_1 537:MMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPE---WRALQERYLWHIPLTYSTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYI: 632 SecStr :HHHHHHSS EEEEEEEETTEEEEEEEE SS SSSTH---HHHS SS EEEEEEESS SS EEEEE SSE-EEE SS S EEESGGG SSSE: ExpBur :bbebbbeeebbbbbbbeeeeeebebebbbbbbebbeeeee---beeeeeeeebbbbbbebbbeeeeeeeebbeeee-eeeeeeeeeebbbbbbebebbbb: queryA 632:VNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTP: 728 :* * * *** * * * * * * * ** * * * ** * * * ** * * ** *: 7nsk_B_1 633:VHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKP: 732 SecStr :EEE TTHHHHHHHHHHH GGGS HHHHHHHHHHHHHHHHTTSS SHHHHTTSTTGGG SHHHHHHHHHHHHHHHHHHHHSS HHHHHHHHHHHHTTHH: ExpBur :bbbeeeebeebbebbeeebeebeeebbbbbbbbbbbbbbbeeeebebbeebbebbeebeebbbbebbbebbeebbeebebeeeeeebeebeeebeebbee: queryA 729:LFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKL: 828 : * * ** * ** **** * ** * ** * * : 7nsk_B_1 733:VI-----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKI: 824 SecStr :HH-----HT SSS- S HHHHHHHHHHHHHHHSSS HHHHHHHHHHHHHHHH TT TTTHHHHH--HHHTTSTTHHHHHHHHHHH S HHHHHHH: ExpBur :bb-----eebeeee-eeeebebbbbeebbbbbbebeeeebeeebeeebebbeeeeeeeebbbbbbebbb--bbbbeeeebbeebbeebeebebbbbbebb: queryA 829:RAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEET: 928 : ** ** * * * * ** * **** ** * ** * * ** ** * * : 7nsk_B_1 825:LYALSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ: 924 SecStr :HHHHHT S HHHHHHHHHHHHH SSS GGGHHHHHHHHHHSTTSHHHHHHHHHHSHHHHHHHS TT HHHHHHHHHHHSS STTTHHHHHHHHHHHHHT: ExpBur :bebbbbbeeeeebeebbeebbebeebbbbbbbebbebbbeeeebbeebbebbeeebeebeeebebbbebbbebbebbbebbbbeeebeebeebbeebeee: queryA 929:GFGSGTRALEQALEKTKANIKWVKENKEVVLQWF: 962 : ** ** **** * * : 7nsk_B_1 925:--GSHLDIFQTVLETITKNIKWLEKNLPTLRTWL: 956 SecStr :--T HHHHHHHHHHHHHHHHTTS TTT: ExpBur :--ebebebbebbbeebebebeeeeeeeeeeeeee: |