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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [890 aa] | M1 family aminopeptidase :AMP1_PLAFQ |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5y3i_A_1 identity=29.8% |
queryA 134:GHRVVLRGVG-GSQPPDIDKTELVEPTEYL----VVHLKGSLVKDSQYEMDSE--FEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDE: 226 :* * *** * *** ** * * ** * * * * * * * * * * : 5y3i_A_1 70:GEDLVFDGVGLKINEISINNKKLVEGEEYTYDNEFLTIFSKFVPKSKFAFSSEVIIHPETNYALTGLYKS--------KNIIVSQCEATGFRRITFFIDR: 161 SecStr :S EEEE S EEEEEEETTEE BTTTEEE SSEEEE GGGS SS EEEEEEEEE GGG TT SEEEEE--------TTEEEEE TTTTGGGTS B S: ExpBur :eeebebbbeebeeeebbbeeeebeeeebbebeeeebbbeeeebeeeebebbbbbbbebeebebbbbbbeb--------eebbbbbbbbbbbbebbbbbbe: queryA 227:PAMKAEFNITLIHPKDL--TALSN-------MLPKGPSTPLPEDPNWNVTEFHTTPKMSTYLLAFIVSEFD-----YVEKQASNGVLIRIWARPSAIAAG: 312 :* * * * * *** * * ** * * ** * * * * : 5y3i_A_1 162:PDMMAKYDVTVTADKEKYPVLLSNGDKVNEFEIPGGRHGARFNDP-------HLKP---CYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKL: 251 SecStr :TT EEEEEEEEEETTT EEEESSEEEEEEEETTTEEEEEEEEE-------EEE ---GGG EEEE EEEEEEEEE TTT EEEEEEEEEGGGGGG : ExpBur :bbbbbebebbbbbeeeebeebbbbbeeeeeeeeeeebbbbebebe-------eebb---bbbbbbbbbebeeeebebebeeeeeebebebbbeeebeebb: queryA 313:HGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEG: 412 : ** * * * *** ***** ** **** * * ** ** * ** ** * * * **: 5y3i_A_1 252:Q--WALECLKKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHNYTGNRVTLRDWFQLTLKEG: 349 SecStr :H--HHHHHHHHHHHHHHHHH SSEEEEEEES SSSEE TTEEEEEGGGT TTTS HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHH: ExpBur :e--bbbebbeebbebbbebbebbbbbeebbbbbbbbbbebbbbbbbbbbbbbebbbbbbeebbbebbeebbbbbbbbbbbbbbbbbbbbebbbbbbbbbb: queryA 413:FASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYL: 504 : * * * * * * * * *** * * ** * ** * * * * * : 5y3i_A_1 350:LTVHRENLFSEEMTKTVTTR----LSHVDLLRSVQFLEDSSPLSHPIRP-ESYVSMENFYTTTVYDKGSEVMRMYLTILGEEYYKKGFDIYI: 436 SecStr :HHHHHHHHHHHHHH THHH----HHHHHHHHHHHHHHHTSTT SS -SEESSGGGG SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :bbbbbbbbbbeeebebebbb----bebbbebbbbbbbbbebebbbbbbb-eebbbbbbbebbbbeebbbbbbbbbbebbeeeebeebbeebb: |