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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [855 aa] | Endoplasmic reticulum aminopeptidase 1,Endoplasmic reticulum aminopeptidase 1 :ERAP1_HUMAN:ERAP1_HUMAN | |
2 | b | QA 1 (A) | non-polymer(NA) | SODIUM ION | 211Q 349F 350N(Q) 351A(S) (identity: 50.0 %/36.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6q4r_A_1 identity=36.3% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGS-: 169 :** *** * * ** * * * * * ** ** * * * ** * * * : 6q4r_A_1 49:WNKIRLPEYVIPVHYDLLIHANLTT-----LTFWGTTKVEITASQPTSTIILHSHHL-----QISRATLRKXXXXRLSEEPLQVLEHPRQEQIALLAPEP: 138 SecStr : SS SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS SEEEEE SS -----EEEEEEEE ---- EEE EEEEETTTTEEEEE SS : ExpBur :beeeebbeebebebbebbbebebee-----eebebebebebebeeebebbbbbbbeb-----eeeebbbee----eeeebebeebeeeebbbbbbebeee: queryA 170:LVKDSQYEMDSEFEGELADDLAGFYRSEYM--EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM-LPKGPSTP--LPEDPNW: 264 :* * * * *** * * ** * * ** ** ******** ** * * * *** * * * ** : 6q4r_A_1 139:LLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELR-ILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEGLIED---: 234 SecStr : TT EEEEEEEEEE BSSSSEEEEEEEE TT EE-EEEEEE TTTTGGGTS B STTS BEEEEEEEE TT EEEESS EEEEEEEETTEEEE---: ExpBur :beeeeebebbbebebebbebbbbbbebebebeeeeee-ebbbbbbbbbbbbbbbbbbbbbebbbbbebebebeeebebbbbbeeeeeeeeeeebbbb---: Contact : b queryA 265:NVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRE: 364 : * * ****** *** * * * * ** * * * **** * * ****** * *** ******** ****: 6q4r_A_1 235:---HFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI--NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRE: 329 SecStr :---EE SB GGG EEEE EEEEEE TTS EEEEEE GGGG--GG HHHHHHHHHHHHHHHHHHT SSEEEEEEESS SSSEE TTEEEEEG: ExpBur :---ebeebeebbbbbbbbbbbebeeeeeebeeebebbbbbbeebb--ebbebbbebbbebbebbbebbebebebebbbbbbbbbbbeebbbbbbbbbbbb: Contact : bbb queryA 365:NSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINT: 464 : **** ** * * ************** ************* * * * * **** **** *** : 6q4r_A_1 330:SALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALNSSHPVSTP---VEN: 425 SecStr :GGT TTT HHHHHHHHHHHHHHHHHTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG GGGGT-HHHHHHHHHHHTSTT SS --- S: ExpBur :ebbbbeeeebebebebebbbebbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeebb-beebbebbebbbbebbbebbbe---bee: queryA 465:PAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGT---L: 561 :**** * ** ** *** * ** ** * ** * ** * ** *** * ** **** *** ** * * : 6q4r_A_1 426:PAQIREMFDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASIXXXX-----VDVKTMMNTWTLQKGFPLITI-TVRGRNVHM: 519 SecStr :HHHHHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHTTTEEE HHHHHHHHHT --------- HHHHHHHHHSS S EEEEE-EEETTEEEE: ExpBur :beebbbbbeebbebbbbbbbbbbbeebeeeebeebbbebbeebeeebbebeebbebbeee---------eebeebbebbbebbbbbbbbb-beeeeebeb: queryA 562:SQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQI: 661 : *** * * ** * * * * ** * *** * * * * * * ** : 6q4r_A_1 520:KQEHYM----KGXXXXXDTGYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASL: 614 SecStr :EEEE ---- ----- EEEEEEETTEEEEEEEEE SSE-EEEE SS S EEESGGG SS EEEETTTHHHHHHHHHHH GGGS HHHHHHH: ExpBur :ebebbe----be-----eeeeebbbbbbbbbeeeeeeeeeebeeee-eebebeeeeebbbbbbebebbbbbbbeeebbeebbebbeeebeebeebbbbbb: queryA 662:INDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAIS: 758 :** ** * * * ** * * * ** * * *** * ** * * * * : 6q4r_A_1 615:INNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI-----DKQTWTD-EGSVSERMLRSQLLL: 708 SecStr :HHHHHHHHHTTSS HHHHHHHHGGGGG HHHHHHHHHHHHHHHHHHHTSS HHHHHHHHHHHHHHHHHHH-----HH SSS- S HHHHHHHHHHHH: ExpBur :bbbbbbbbeeeebebeebbebbbbbeebeebbbbbbbbebbeebbbbbbbeebeebbeebbebbbebbeebb-----eebebee-eeebeebbbbbebbb: queryA 759:TACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQD: 858 : ** * * * * * * * * * *** * ** * * * * * : 6q4r_A_1 709:LACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVF--AVGAQSTEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKGDKIKTQE: 806 SecStr :HHHHTT HHHHHHHHHHHHHHHHTTT HHHHHHHH--HHHTTSHHHHHHHHHHHTT HHHHHHHHHHHTT HHHHHHHHHHHHHTSSS GGG: ExpBur :bbbebebeebbeebebebeebeeeeeeeebbbbbbbbbb--bbbbeeeebbebbbeebeebebbbbeebbbebbbbbeeeebbeebbebbeebeebbbbb: queryA 859:ATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVV: 958 : * * * * * * ** ** ** * * *** * * * ** * * * ** * * : 6q4r_A_1 807:FPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKEN--GSQLRCVQQTIETIEENIGWMDKNFDKI: 904 SecStr :HHHHHHHHHHSTTTHHHHHHHHHHTHHHHHHHH TT HHHHHHHHHHHTT S - HHHHHHHHTTGGG--TTT HHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :bbebbebbbebeebeebbbebbeeebeebbeebebbbebbbebbbbbbebbbeee-beebeebbeebeee--bbebebbebbbbbbebbbebbeebeeeb: queryA 959:LQWF: 962 : * : 6q4r_A_1 905:RVWL: 908 SecStr :HHHH: ExpBur :eebb: |