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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [910 aa] | Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN | |
2 | b | K 1 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 128N 181E(D) (identity: 50.0 %/36.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5j6s_A_1 identity=36.8% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLS--QGHRVVLRG--VGGSQPPDIDKTELVEPTEYLV: 163 :* *** * * * ** * * * ** ** *** * * ** * * * * * * * : 5j6s_A_1 64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157 SecStr : SS TTEEEEEEEEEEEEETTTTE-----EEEEEEEEEEESS SEEEEE S EEEEEEEEESS GGG SS B EEE GGGTEEEEE S-S : ExpBur :beeeebbebbebebbebbbebebeeee-----bebebebebebeeebeebbbbbeebeeeebebbbeebeebeeeeeebeebeeeeebbbbbbbe-eebe: Contact : b queryA 164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259 : *** * * * * *** * * * * * ** ******* ** * * ***** ** * : 5j6s_A_1 158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248 SecStr :TT E--------EEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B TTS BEEEEEEEE TT EEEESS- EEEEEE SSS : ExpBur :eeee--------bbbbbebebebeeebbbbbebebebeeeeeeebbbbbbbbbbbbebbbbbbbbebbbebbbebebeeebebbbbb-beeeeeebeeee: Contact : b queryA 260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358 : ** * ** ****** * ** * * ** * * * * *** * * * *** * * * *** *******: 5j6s_A_1 249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340 SecStr :EEE------EE SB GGG EEEE EEEEEE TTS EEEEEE GGGGGG H--HHHHHHHHHHHHHHHHHT SSEEEEEEESS SSSEE TT: ExpBur :bbb------bbeebeebbbbbbbbbbbbbeeeebebeeebebbbbbbeebeebbe--bbbebbbebbebbbebbebebebebbbbbbbbbbbeebbbbbb: queryA 359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458 :* **** ****** ** * * * **************** ***** ******* * * * * ** * * * ** * * *: 5j6s_A_1 341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439 SecStr :EEEEEHHHH TTT HHHHHHHHHHHHHHHHHTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG HHHHT-HHHHHHHHHHHTSSS SS : ExpBur :bbbbbbebbbbeeebbbbebebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbbeebbebbee: queryA 459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEA----------VNNRSIQLPTT----------VRD: 538 :* ** ** * ** ** *** * ** ** * * * ** * * * ** * * * : 5j6s_A_1 440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKE: 536 SecStr : --- SHHHHHTT STTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEE HHHHHHHHHT STT SSSSS TTHHHHHHHHHHHHH: ExpBur :b---eeeeebbbbbbebbbbbbbbbbbbbbeebeeebbeebbbebbeebeeebbebeebbebbbebbeeeeeeeebebeeeeeeeeeeebbeeebeebee: queryA 539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFLL-----DPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYR: 631 : * **** * * * * * ** ** ** * * * * * * ** * *** : 5j6s_A_1 537:MMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPE---WRALQERYLWHIPLTYSTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYI: 632 SecStr :HHHHHHHS S EEEEEE STTEEEEEEEE SS TTSHH---HHHTTSS EEEEEESS EEEE SSE-EEEE SS S EEESGGG SS E: ExpBur :bbebbbebbbbbbbbbeeeeeebebebbbbbbbbeeeeee---beebbeebebebbbbbbbeeeeeeeeeebeeee-bebebeeebebbbbbbbbbbbbb: queryA 632:VNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTP: 728 :* * * *** * * * * * * * ** * * * ** * * * ** * * ** *: 5j6s_A_1 633:VHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKP: 732 SecStr :EEETTTHHHHHHHHHHHHGGGS HHHHHHHHHHHHHHHHTTSS HHHHHHHHGGGGG HHHHHHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHTTHH: ExpBur :bbbeeebbeebbebbeeebeebeebbbbbbbbbbbbbbbbebbebeebbebbbbbeebeebbbbbbbbebbeebbbbbebeebeebbebbbebbbebbee: queryA 729:LFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKL: 828 : * * ** * ** **** * ** * ** * * : 5j6s_A_1 733:VI-----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKI: 824 SecStr :HH-----HS SSS- S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTTT S TTTHHHHH--HHHTTSHHHHHHHHHHHHH S HHHHHHH: ExpBur :bb-----eebebbe-eeebbeebbbeebbebbbbbeeeebeeebeebbeebeeeebeeebebbbbebbb--bbbbeeeebbebbbebbeebbbbbbeebb: queryA 829:RAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEET: 928 : ** ** * * * * ** * **** ** * ** * * ** ** * * : 5j6s_A_1 825:LYALSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ: 924 SecStr :HHHHTT S HHHHHHHHHHHHHTSSS GGGHHHHHHHHHHSGGGHHHHHHHHHHSHHHHHHHS SS HHHHHHHHHHHTT SHHHHHHHHHHHHHHTTT: ExpBur :bebbbbbeeeebbeebbebbbeeeebbbbbbbebbebbbeeeebbebbbebbeeebeebeeebebbbebbbebbebbbebbbbeebeeebeebbeebeee: queryA 929:GFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967 : ** ** **** * * * : 5j6s_A_1 925:--GSHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 961 SecStr :--T THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :--ebebebbebbbbbbebbbebbeebbeebeebbeebee: |