CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [860 aa] | Leucyl-cystinyl aminopeptidase :LCAP_HUMAN | |
2 | b | K 1 (A) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 83D(L) 112T(Q) 173D(G) 175Q(N) (identity: 0.0 %/36.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4pj6_A_1 identity=36.4% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGSL: 170 :* *** * * * * ** * ** * * ** ** * ** ** * * *: 4pj6_A_1 10:WAQIRLPTAVVPLRYELSLHPNLTS-----MTFRGSVTISVQALQVTWNIILHSTGHNIS-----RVTFMSXVSSQEKQAEILEYAYHGQIAIVAPE-AL: 98 SecStr : SS SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS EEEEEEE S EEE-----EEEEE - S EE EEEEEGGGTEEEEEEEE-EE: ExpBur :eeeeebbebbebeebebbbebebee-----eebebebebbbebeeebeebbbbbeebeee-----ebbbbe-eeeeeeebeebeeeebbbbbbebee-eb: Contact : b b queryA 171:VKDSQYEMDSEFEGELADDLAGFYRSEYM-EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVTEF: 269 : * * *** * * * * * ** ** ******** ** * * * ****** ** * * * **: 4pj6_A_1 99:LAGHNYTLKIEYSANISSSYYGFYGFSYTDESNEKKYFAATQFEPLAARSAFPCFDEPAFKATFIIKIIRDEQYTALSNM-PKKSSVVL--DDGLVQDEF: 195 SecStr : TT EEEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTHHHHS B SSS EEEEEEEEEEETTSEEEESS- EEEE --TTSEEEEEE: ExpBur :beeeebebbbebebebeeebebbbbbebebeeeeebebbbbbbbbbbbbebbbbbbbbebbbbbbbbbbbeeebebbbbb-eeeeeeee--eeebbebeb: Contact : b b queryA 270:HTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLF: 369 : ****** **** * * ** * * * * * * *** * * ** *** * * *** ********* * ** ** : 4pj6_A_1 196:SESVKMSTYLVAFIVGEMKNL-SQDVNGTLVSIYAVPEKIGQVH--YALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREETLLY: 292 SecStr : SEEGGG EEEE EEE-EEEETTEEEEEEE GGGGGG H--HHHHHHHHHHHHHHHHH S SSEEEEEEES TT SSEEEEEHHHH : ExpBur :eebeebbbbbbbbbbbbbeee-eeebeebebbbbbbeeebeebe--bbbebbbebbebbbebbebebebebbbbbbbbeeebbebbbbbbbbbebebbeb: queryA 370:DPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDV----YRVMAVDALASSHPLSTPASEINTP: 465 :* ** * *************** ************ ** * * * * * * **** * * : 4pj6_A_1 293:DSNTSSMADRKLVTKIIAHELAHQWFGNLVTMKWWNDLWLNEGFATFMEYFSLEKI-----FKELSSYEDFLDARFKTMKKDSLNSSHPIS---SSVQSS: 384 SecStr : TTTS HHHHHHHHHHHHHHHHHHHTTTTEEESSGGGHHHHHHHHHHHHHHHHHHH----- GGG THHHHHHHHHHHHHHHTSTT SS--- SH: ExpBur :eeeebbbeebbebbbebbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeee-----beebbbebebbebbbebbeebbbebbeebe---eebeee: queryA 466:AQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTL--SQ: 563 : ** * ** ** ** * * ** ****** *** * *** * * * * **** *** ** * *: 4pj6_A_1 385:EQIEEMFDSLSYFKGSSLLLMLKTYLSEDVFQHAVVLYLHNHSYASIQSDDLWDSFNEVTNQ-----TLDVKRMMKTWTLQKGFPLVTVQKKGKELFIQQ: 479 SecStr :HHHHTT HHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHTTEEE HHHHHHHHHHHTTT-----SS SHHHHHHHHSSSS BEEEEEEETTEEEEE : ExpBur :eebeebeeebbbbbbbbbbbbbbeebeeeebbebbbebbeebeeeebebbebbebbbeebee-----eeebeebbebbbebbbbbbbbbeeeeeebebeb: queryA 564:EHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV--RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQI: 661 :* * * * * * * ** * * ** * * *** * * * ** ** : 4pj6_A_1 480:ERFFLNM-XXXXXXSDTSYLWHIPLSYVTEGRNYSKYQSVSLLDKKSGVINLTEEVLWVKVNINMNGYYIVHYADDDWEALIHQLKINPYVLSDKDRANL: 578 SecStr : B ------- EEEEEEEE SSS EEEEEEEE SSEEEEE SS SEEEESGGG SS EEEE HHHHHHHHHHHHH GGGS HHHHHHH: ExpBur :ebbebee-------eeeeeebbbbbbbbbbbeeeeeeeeeeebeeeeeebebeeebebbbbbbebebbbbbbbeeebbebbbebbeeebeebebebbbbb: queryA 662:INDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNN----------TNNWREIPENLMDQY: 751 :** * ** *** * * * * ** * * * * ** * * * ** * : 4pj6_A_1 579:INNIFELAGLGKVPLKRAFDLINYLGNENHTAPITEALFQTD---LIYNLLEKLGYM-DLASRLVTRVFKLLQNQIQQQTWTDEGTPSMRELRSALLE--: 672 SecStr :HHHHHHHHHHTSS HHHHHHHHGGGGG HHHHHHHHHHHH---HHHHHHHHTT H-HHHHHHHHHHHHHTHHHHHT SSS S HHHHHHHHHHHH--: ExpBur :bbbbbbbbebeebebebbbebbebbeebeebbbbebbbebbb---ebbbbbbbbeee-ebbeebbebbbebbeebbeebebeeeeebbebebbeebbe--: queryA 752:SEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNP: 851 : ** * ** ** ** * * * * *** * * ** : 4pj6_A_1 673:-------FACTHNLGNCSTTAMKLFDDWMASNGTQSLPTDVMTTVF--KVGAKTDKGWSFLLGKYISIGSEAEKNKILEALASSEDVRKLYWLMKSSLNG: 763 SecStr :-------HHHHTT TTHHHHHHHHHHHHHHTTT S GGGHHHHH--HHHTTSHHHHHHHHHHHHH HHHHHHHHHHHTT S HHHHHHHHHHHHTT: ExpBur :-------bbbebebeebbeebeeebeebbeeeeeeebebbbbbbbb--bbbbeeeebbebbbebbeeeeebeebebbbebbbbbeeeebbeebbebbbee: queryA 852:DLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWV: 951 :* * * * * * **** ** ** ** * * *** * * * * * *** ** * : 4pj6_A_1 764:DNFRTQKLSFIIRTVGRHFPGHLLAWDFVKENWNKLVQKFPLGSYTIQNIVAGSTYLFSTKTHLSEVQAFFENQSEATF--RLRCVQEALEVIQLNIQWM: 861 SecStr :SSS GGGHHHHHHHHHHSGGGHHHHHHHHHHTHHHHHHHS TTSHHHHHHHHHHHTT SHHHHHHHHHHHHTT HHHH--TSHHHHHHHHHHHHHHHHH: ExpBur :eebebebbbbbbebbbebeebbeebbebbeeebeebeeebeeeeeebebbbebbbebbbeeebbeebeebbeeeeeebb--eeebbebbbbebebbbebb: queryA 952:KENKEVVLQWF: 962 : * * : 4pj6_A_1 862:EKNLKSLTWWL: 872 SecStr :HHHTGGGGG : ExpBur :eebbeebeebb: |