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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [857 aa] | Leucyl-cystinyl aminopeptidase, pregnancy serum form :LCAP_HUMAN | |
2 | b | I 1 (I) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 651S(Y) 690R(N) (identity: 0.0 %/36.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:8cgp_A_1 identity=36.3% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGSL: 170 :* *** * * * * ** * ** * * ** ** * ** ** * * *: 8cgp_A_1 9:WAQIRLPTAVVPLRYELSLHPNLTS-----MTFRGSVTISVQALQVTWNIILHSTGHNIS-----RVTFMSXXXSQEKQAEILEYAYHGQIAIVAPE-AL: 97 SecStr : SSS SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS EEEEEEE SS EEE-----EEEEE --- EE EEEEETTTTEEEEEEEE-EE: ExpBur :eeeeebeebbebeebebebebebee-----eebebebbbbbebeeebeebbbbbeebeee-----ebbbee---eeebebeeeeeeebbbbbbebee-bb: queryA 171:VKDSQYEMDSEFEGELADDLAGFYRSEYM-EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVTEF: 269 : * * *** * * * * * ** ** ******** ** * * * ****** ** * * * **: 8cgp_A_1 98:LAGHNYTLKIEYSANISSSYYGFYGFSYTDESNEKKYFAATQFEPLAARSAFPCFDEPAFKATFIIKIIRDEQYTALSNM-PKKSSVVL--DDGLVQDEF: 194 SecStr : TTEEEEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTT HHHHS B STT BEEEEEEEEETTSEEEESS- EEEEEEE--TTTEEEEEE: ExpBur :eeeeeeebbbebebebeebbbbbbbbebeeeeeeebebbbbbbbbbbbbebbbbbbbbebbbbbbbbbbbeeebebbbbb-eeeeeeee--eeebbebeb: queryA 270:HTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLF: 369 : ****** **** * * ** * * * * * * *** * * ** *** * * *** ********* * ** ** : 8cgp_A_1 195:SESVKMSTYLVAFIVGEMKNLS-QDVNGTLVSIYAVPEKIGQVH--YALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREETLLY: 291 SecStr : SB GGG EEEE EEEE-EEETTEEEEEEE GGGGGG H--HHHHHHHHHHHHHHHHH SSEEEEEEESS SSSEE TTEEEEEHHHH : ExpBur :bebeebbbbbbbbbbbbbeeee-eebeebebbbbbbeebbebbe--bbbebbbebbebbbebbebebebebbbbbbbbbbbeebbbbbbbbbbbbbbbbb: queryA 370:DPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDV----YRVMAVDALASSHPLSTPASEINTP: 465 :* ** * *************** ************ ** * * * * * * **** * * : 8cgp_A_1 292:DSNTSSMADRKLVTKIIAHELAHQWFGNLVTMKWWNDLWLNEGFATFMEYFSLEKI-----FKELSSYEDFLDARFKTMKKDSLNSSHPIS---SSVQSS: 383 SecStr : TTT HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH----- GGG THHHHHHHHHHHHHHHTSTT SS--- SH: ExpBur :eeeebbbebebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeee-----beebbbebebbebbbebbeebbbebbbebb---bebeee: queryA 466:AQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTL--SQ: 563 : ** * ** ** ** * * ** ****** *** * *** * * * * **** *** ** * *: 8cgp_A_1 384:EQIEEMFDSLSYFKGSSLLLMLKTYLSEDVFQHAVVLYLHNHSYASIQSDDLWDSFNEVTNQ-----TLDVKRMMKTWTLQKGFPLVTVQKKGKELFIQQ: 478 SecStr :HHHHHTSSHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHTTEEE HHHHHHHHHHHTTT-----SS HHHHTHHHHHS S EEEEEEEETTEEEEEE: ExpBur :eebbbbbbbbbeebbbbbbbbbbeebeeeebeebbbebbeebeeebbebeebbebbbebbee-----eeebeebbebbbebebbbbbebeeeeeebebeb: queryA 564:EHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV--RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQI: 661 :* * * * * * ** * * ** * * *** * * * ** ** : 8cgp_A_1 479:ERFFLNXXXXXXXXXX-SYLWHIPLSYVTEGRNYSKYQSVSLLDKKSGVINLTEEVLWVKVNINMNGYYIVHYADDDWEALIHQLKINPYVLSDKDRANL: 577 SecStr :EE ----------- EEEEEEEEETTS EEEEEEEE SSEEEEE SS EEEEEESGGG SS EEEE HHHHHHHHHHHHH GGGS HHHHHHH: ExpBur :eebeee-----------eeebbbbbbbbbbbeeeeeeeeeeebeeeeeebebeeebebbbbbbebbbbbbbbbbeebbeebbebbeeebebbebbbbbbb: Contact : b queryA 662:INDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNN----------TNNWREIPENLMDQY: 751 :** * ** *** * * * * ** * * * * ** * * * ** * : 8cgp_A_1 578:INNIFELAGLGKVPLKRAFDLINYLGNENHTAPITEALFQTD---LIYNLLEKLGYM-DLASRLVTRVFKLLQNQIQQQTWTDEGTPSMRELRSALLE--: 671 SecStr :HHHHHHHHHHTSS HHHHHHHHGGGGG HHHHHHHHHHHH---HHHHHHHHHT H-HHHHHHHHHHHHHTHHHHHH SS S HHHHHHHHHHHH--: ExpBur :bbbbbbbbebeebebebbbebbebbeebeebbbbebbbebbe---bbbbbbbbeeee-ebbeebbeebbeebeebbeebeeeeeeebbebbbbeebbe--: Contact : b queryA 752:SEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNP: 851 : ** * ** ** ** * * * * *** * * ** : 8cgp_A_1 672:-------FACTHNLGNCSTTAMKLFDDWMASNGTQSLPTDVMTTVF--KVGAKTDKGWSFLLGKYISIGSEAEKNKILEALASSEDVRKLYWLMKSSLNG: 762 SecStr :-------HHHHTT TTHHHHHHHHHHHHHHTTT S GGGHHHHH--HHHTTSHHHHHHHHHHHTT S HHHHHHHHHHHTT S HHHHHHHHHHHHHT: ExpBur :-------bbbebebeebeeebeeebeebbeeeeeeebebbbbbbbb--bbbbeeeebbebbbebbeeeebbbbbbbbbebbbbbeeeebbeebbebbbee: queryA 852:DLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWV: 951 :* * * * * * **** ** ** ** * * *** * * * * * *** ** * : 8cgp_A_1 763:DNFRTQKLSFIIRTVGRHFPGHLLAWDFVKENWNKLVQKFPLGSYTIQNIVAGSTYLFSTKTHLSEVQAFFENQSEATF--RLRCVQEALEVIQLNIQWM: 860 SecStr :SSS GGGHHHHHHHHHHSTTTHHHHHHHHHHTHHHHHHHS TTSHHHHHHHHHHHTT SHHHHHHHHHHHHTS HHHH--T HHHHHHHHHHHHHHHHH: ExpBur :eebebbbbbebbebbbeeeebbebbbebbbeebeebeeebebbbebbbbbbebbbebbbeeeebeebeebbeeeeeebb--ebbbbebbbeebeebbebb: queryA 952:KENKEVVLQWF: 962 : * * : 8cgp_A_1 861:EKNLKSLTWWL: 871 SecStr :HHHHHHHHHHT: ExpBur :eebbeebeeeb: |