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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [915 aa] | Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN | |
2 | b | F 1 (F) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 232E(N) 271T 272T 273P(V) 274K 509Y (identity: 66.7 %/36.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7nup_A_1 identity=36.7% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLSQGHRVVLRGVGGSQP----PDIDKTELVEPTEYLV: 163 :* *** * * * ** * * * ** ** *** * * ** * * * * * * : 7nup_A_1 64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157 SecStr : SS SSEEEEEEEEEEEE SSS E-----EEEEEEEEEEE S SEEEEE S EE EEEESSSGGG TT EE EEEEEGGGTEEEEE S-S : ExpBur :eeeeebbeebebbebebbbebebeeee-----bebebebebebeeebeebbbbbeebebeebbbbbeebeebeeeeeebebbebeeebbbbbebe-eebe: queryA 164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259 : *** * * * * *** * * * * * ** ******* ** * * ***** ** * : 7nup_A_1 158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248 SecStr :TTEE--------EEEEEEEEEE B SSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B STTS BEEEEEEEE TTSEEEESS- EEEEEE TTS : ExpBur :eeee--------bebbbebebebeeebebbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbebebeeebebbbbb-eeeeeeeeeeee: Contact : b queryA 260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358 : ** * ** ****** * ** * * ** * * * * *** * * * *** * * * *** *******: 7nup_A_1 249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340 SecStr :EEE------EE SB GGG EEEE EEEEEE TT EEEEEE GGGGGG H--HHHHHHHHHHHHHHHHHTS SSEEEEEEESS SSSEE TT: ExpBur :bbb------ebeebeebbbbbbbbbbbbbeebebebeeebebbbbbbbebeebbe--bbbebbeebbebbbebbebebebebbbbbbbbbbbeebbbbbb: Contact : bbbb queryA 359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458 :* **** ****** ** * * * **************** ***** ******* * * * * ** * * * ** * * *: 7nup_A_1 341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439 SecStr :EEEEEGGGT TTT HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG GGGTT-HHHHHHHHHHHTSTT SS : ExpBur :bbbbbbebbbbeeebbbbeeebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbbbbeebbbeebbebbbe: queryA 459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEA----------VNNRSIQLPTT----------VRD: 538 :* ** ** * ** ** *** * ** ** * * * ** * * * ** * * * : 7nup_A_1 440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKE: 536 SecStr : --- SHHHHHHT SHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHTTTEEE HHHHHHHHHT SS STT SSSSS HHHHHHHHHHHHHHH: ExpBur :b---eeeeebbbbbeebbebbbbbbbbbbbeebeeeebbbbbbebbeebeeebbebeebbebbbebbeeeeeeebbebeeeeeeeeebeebeeebeebee: Contact : b queryA 539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFLL-----DPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYR: 631 : * **** * * * * * ** ** ** * * * * * * ** * *** : 7nup_A_1 537:MMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPE---WRALQERYLWHIPLTYSTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYI: 632 SecStr :HHHHHHHS SEEEEEEEEETTEEEEEEEEE SS SSSTT---TTTTSSS EEEEEEETTEEEEEEEEE SSE-EEEE SS S EEESGGG SSSE: ExpBur :bbebbbebebbbbbbbbeeeeebebebbbbbbeeeeeeee---beeebeeeebbbbbbbbbeeeeeeeeebbeeee-eebebeeebebbbbbbbbbbbbb: queryA 632:VNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTP: 728 :* * * *** * * * * * * * ** * * * ** * * * ** * * ** *: 7nup_A_1 633:VHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKP: 732 SecStr :EEETTTHHHHHHHHHHTT TTS HHHHHHHHHHHHHHHTTTSS HHHHHHHGGGGGG HHHHHHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHSHH: ExpBur :bbbeeebbeebbebbeeebeebeeebbbbbbbbbbbbbbbeebebebbbebbebbeebebbbbbbbbbebbbebbbbbeeeebeebbebbbebbbeebee: queryA 729:LFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKL: 828 : * * ** * ** **** * ** * ** * * : 7nup_A_1 733:VI-----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKI: 824 SecStr :HH-----HH SSS- S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTTT S GGGHHHHH--HHHTTSHHHHHHHHHHHHH S HHHHHHH: ExpBur :bb-----eebeebe-eeebbebbbbeebbebbbebebeebbeebeebbeebeeeeeeeebebbbbebbb--bbbbeeeebbebbbebbeebebbbbeebb: queryA 829:RAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEET: 928 : ** ** * * * * ** * **** ** * ** * * ** ** * * : 7nup_A_1 825:LYALSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ: 924 SecStr :HHHHHT HHHHHHHHHHHHHSSSS GGGHHHHHHHHHHSSTTHHHHHHHHHHTHHHHHHHS TTSHHHHHHHHHHHTT SHHHHHHHHHHHHHHHHS: ExpBur :bebbbbbeeeebbeebbebbbeeeebebbebbebbeebbebeebbebbbebbeeebeebeeebebbbebbbbbbebbbebbbbeebbeebeebbeebeee: queryA 929:GFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967 : ** ** **** * * * : 7nup_A_1 925:--GSHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 961 SecStr :--S THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :--ebebebbebbbebbebbbebbeebbeebeebbeebee: |