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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [875 aa] | Glutamyl aminopeptidase :AMPE_HUMAN | |
2 | b | F 1 (F) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 807E 810D(N) 843R (identity: 66.7 %/37.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4kx8_A_1 identity=37.8% |
queryA 59:PASATTLDQSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYT-LSQGHRVVLRGVGGSQPPDIDKTELVE: 157 :*** * * * *** * * * * * * * * * * * * : 4kx8_A_1 4:PASE---DESGQWKNFRLPDFVNPVHYDLHVKPLLEED-----TYTGTVSISINLSAPTRYLWLHLRETRITRLPELKR-----------PSGDQVQVRR: 84 SecStr : B --- SGGGSSS SSEEEEEEEEEEEEEGGGT-----EEEEEEEEEEEE S EEEEEEE SSEEEEEEEEE -----------TTS EE EEE: ExpBur :eeee---eeeeebeeeebbebbebeebebbbebebeee-----ebebebbbbbebeeebeebbbbbbebebeeebebeb-----------eeeeebeeee: queryA 158:PTEYLVVHLKGSLVK--------DSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM: 249 : ** * * ** * * * **** * * * * * ************ ** * *** *****: 4kx8_A_1 85:CFEYKKQEYVVVEAEEELTPSSGDGLYLLTMEFAGWLNGSLVGFYRTTYTENGRVKSIAATDHEPTDARKSFPCFDEPNKKATYTISITHPKEYGALSNM: 184 SecStr :EEEEGGGTEEEEEEEEEE SS EEEEEEEEEESSS SSEEEEEEEEETTEEEEEEEEE TTTTHHHHS B STT BEEEEEEEEETTSEEEESS: ExpBur :bbbbeeeebbbbbbeeeeeebeeeeebebbbebbbebeeebebbbbbebebeeeeebbbbbbbbbbbbbbbbbbbbbbebbbbbebbbbbbeebebbbbb: queryA 250:-LPKGPSTPLPEDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPD: 348 : * * * * * * ***** * * ** * * * * ** * * * * *** * * **: 4kx8_A_1 185:PVAKEESV----DDKWTRTTFEKSVPMSTYLVCFAVHQFDSVKRISNSGKPLTIYVQPEQ--KHTAEYAANITKSVFDYFEEYFAMNYSLPKLDKIAIPD: 278 SecStr : EEEEEES----SSSEEEEEE SB GGG EEEE EEEEEE TTS EEEEEE GGG--GGGGHHHHHHHHHHHHHHHHHTT SSS EEEEE SS: ExpBur :eeeeeeee----eeebbebbbeebeebbbbbbbbbbbebebbeeebeeebebbbbbbeeb--eebbebbbebbeebbbbbbebbebebebebbbbbbbbb: queryA 349:FNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDA: 448 :* ******** **** ** ** * *** ** ** **** ****** ** ** ********** * ** ** * * * * ** * * : 4kx8_A_1 279:FGTGAMENWGLITYRETNLLYDPKESASSNQQRVATVVAHELVHQWFGNIVTMDWWEDLWLNEGFASFFEFLGVNHAETDWQMRDQMLLEDVLPVQEDDS: 378 SecStr : SSSEE TTEEEE GGGT TTTS HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG HHHHHHHHTHHHHHHHTT: ExpBur :bbeebbbbbbbbbbbbbbbbbbeeebbbebbbebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeeebeebebeebbbbebbbebbeebb: queryA 449:LASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMG: 548 :* **** ** * ** ****** * **** * * ** * * * ** ** * * ** ***: 4kx8_A_1 379:LMSSHPIIV---TVTTPDEITSVFDGISYSKGSSILRMLEDWIKPENFQKGCQMYLEKYQFKNAKTSDFWAALEEAS-----RLP--VKEVMDTWTRQMG: 468 SecStr :STT SS --- SHHHHHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHSTTEEE HHHHHHHHHHHH----- S --HHHHHGGGTSS : ExpBur :bebbbebeb---ebeebeebbbbbbebbebbbbbbbbbbbebbeeeebbebbbebbeebeeebbebebbbebbeebb-----eee--beebbbbbbebbb: queryA 549:FPVITVDTSTGTLSQEHFLLDPDSNVTR-PSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFS-----TSGNEWVLLNLNVTGYYRVNYDEENWRKI: 642 : ** * * ***** * ** * * * * * *** * * ***** * *: 4kx8_A_1 469:YPVLNVN-GVKNITQKRFLLDPRANPSQPPSDLGYTWNIPVKWTEDNITSS---VLFNRSEKEGITLNXXXXSGNAFLKINPDHIGFYRVNYEVATWDSI: 564 SecStr : EEEEEE-TTTEEEEEE S TTS TT S TTTT EEEEEEETTEEEE---EEE TT TT EE ---- S EESGGG SSSEEE HHHHHHH: ExpBur :bbbbebe-eeeebebebbbbbeebeeeeeebebebebbbbbbbbbeeeeee---eebeeeeeebbebe----eeeeebbbbbebbbbbbbbbeeebbeeb: queryA 643:QTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMF-DRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWR: 741 : * * * ** * *** ** * *** * * * ** * * ** * * * * ** * * : 4kx8_A_1 565:ATALSLNHKTFSSADRASLIDDAFALARAQLLDYKVALNLTKYLKREENFLPWQRVISAVTYIISMFEDDKELYPMIEEYFQGQVKPI-----ADSLGWN: 659 SecStr :HHHHHHHGGGS HHHHHHHHHHHHHHHHTTSS HHHHHHTTGGGGG HHHHHHHHHHHHHHHHHTTT TTHHHHHHHHHHHHHHHH-----HHHH SS: ExpBur :beebeeebeebeebbbbbbbbbbbbbbbbeebebebbbebbebbeebeebbbbebbbebbebbbebbeebeebeebbeebbeebbeeb-----beebebe: queryA 742:EIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEE-EWDFAWEQFRNATLVNEADKLRAALACSKELWI: 840 : ** * * * ** ** * *** ** * * * ** * * ** ** * : 4kx8_A_1 660:DAGDHVT-KLLRSSVLGFACKMGDREALNNASSLFEQWLNGTVSLPV--NLRLLVYRYGMQNSGNEISWNYTLEQYQKTSLAQEKEKLLYGLASVKNVTL: 756 SecStr : S HHH-HHHHHHHHHHHHHTT HHHHHHHHHHHHHHTTT T--TTHHHHHHHHHHHH HHHHHHHHHHHHH HHHHHHHHHHHTT S HHH: ExpBur :eeeebbe-ebbbeebbbbbbebebeebbeebbebbeebeeeeeebeb--bbbebbbebbbeeeeeeebbeebbeebeeeebbbbbebbbbbbbbbeeeeb: Contact : bb b queryA 841:LNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQA: 940 :* *** ** ** * * * * * * ** * * * * ** * * * * * * * ** : 4kx8_A_1 757:LSRYLDLLKDTNLIKTQDVFTVIRYISYNSYGKNMAWNWIQLNWDYLVNRYTLNNRNLGRIV-TIAEPFNTELQLWQMESFFAKYPQAGAGEKPR--EQV: 853 SecStr :HHHHHHHTT TTTS GGGHHHHHHHHHHSTTHHHHHHHHHHHTHHHHHHHH TT HHHHHGG-GGGTT SHHHHHHHHHHHHHS GGGHHHH--HHH: ExpBur :beebbebbeeeebbebbbbbebbebbbebeebbebbbebbeebbeebeebbeebebebbebb-bbbeebbeeebbeebeebbeebeebbbbeebb--eeb: Contact : b queryA 941:LEKTKANIKWVKENKEVVLQWF: 962 :** * ** * * **: 4kx8_A_1 854:LETVKNNIEWLKQHRNTIREWF: 875 SecStr :HHHHHHHHHHHHHHHHHHHHHH: ExpBur :bbbbebbbbbeeebeeebeebb: |