CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [902 aa] | Aminopeptidase N :AMPN_PIG | |
2 | b | F 1 (F) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 316Y 319N 371P (identity: 100.0 %/79.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4fkk_A_1 identity=79.8% |
queryA 67:QSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHL: 166 :*** ******* ** **** ********** *** *** * *** * * ************** *** ******* ** * ** ***** ********: 4fkk_A_1 2:QSKPWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYT-TQGHMVVLRGVGDSQVPEIDRTELVELTEYLVVHL: 100 SecStr : GGGSSS SSEEEEEEEEEEEE S SSS EEEEEEEEEEEESS EEEEEEE SEEE - SSSSSEEEESTT EEEEEEETTTTEEEEEE: ExpBur :eeeebeeeebeebbebebbebebbbebeeeeeeebebebebebebebeeebebbbbbbbebebe-beeeebebeeeeebeebebeebeebeebbbbbbbb: queryA 167:KGSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNV: 266 :**** *** *** ******************** ** ****** **************** ******** ******* *** **** ***** *: 4fkk_A_1 101:KGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSV: 200 SecStr :EEEE TT EEEEEEEEEEE SSSSEEEEEEEEETTEEEEEEEEE TTTTGGGTS B TT BEEEEEEEEETTSEEEESS BSSS EE TT TTEEE: ExpBur :eeebeeeeebebbbebebebbeeebbbbbbebeeeeeebbbbbbbbbbbbbbbbbbbbbbbebbbebebbbbbeeebebbbbbeeeeeeeebeeeeebbb: queryA 267:TEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENS: 366 :*** *** ******* ***** * * *********** *** *** ************** ** * ********* ******************** : 4fkk_A_1 201:TEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENA: 300 SecStr :EEB SB GGG EEEES EEEEEE TTS EEEEEE HHHHHTTTTHHHHHHHHHHHHHHHHHTTS SSSEEEEEEETT TT EE TTEEEEEHHH: ExpBur :bebeebeebbbbbbbbbbbebeebeeebeeebebebbbbbebbeeebbebbbebbbebbebbeebbebebebebbbbbbbbebeeebbbbbbbbbbbbeb: Contact : b b queryA 367:LLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPA: 466 :***** *** ************************ ********************* ********** * ***************** *** * ****: 4fkk_A_1 301:LLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPA: 400 SecStr :H TTT HHHHHHHHHHHHHHHHHTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTS GGGGHHHHTHHHHHHHHTSTT S GGG SHH: ExpBur :bbbbeebbbbebebebbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbbbbbbbbbbeebbeebebeebbbbebbbebbeebbeeebebbbbeeeebeeee: Contact : b queryA 467:QISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNR-SIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLSQEH: 565 :**** ** ********* **** ** ** ** ******* ****** ** ** *** ** ** ** *** ** *************** ** ** *: 4fkk_A_1 401:QISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVITVDTKTGNISQKH: 500 SecStr :HHHTTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHTTEEE HHHHHHHHHHHHHT SS SS HHHHHHHHHSS S EEEEEETTTTEEEEEE: ExpBur :ebeebeeebbebbbbbbbbbbbebbeeebbeebbbebbeebeeeebebeebbebbbebbeeeeeeeebeebeebbbbbbebbbbbbbbbebeebebebeb: queryA 566:FLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV-RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQIIND: 664 :**** ***** * * * ***** ** * * *** ** ****** * ***** ***** ***** *** ** *** * ******** * *: 4fkk_A_1 501:FLLDSESNVTRSSAFDYLWIVPISSIKNGVMQDHYWLRDVSQAQNDLFKTASDDWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYD: 600 SecStr : SSTT S TTTT EEE EEETTEE EEE S SEEE GGG TT EEESGGG SSSEEE HHHHHHHHHHHHH GGGS HHHHHHHHHH: ExpBur :bbbeeeeeeeeebeeebbbbbbbbbbeeeeebeebbbeeeeeeeeebbebeeeebbbbbbebbbbbbbbbbeebbebbbebbeeebeebeebbbbbbbbb: queryA 665:AFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNG: 764 : **** ** ******* ***** * **** ********* ************* ** *** *** ** * ** * ********** **********: 4fkk_A_1 601:SFNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNG: 700 SecStr :HHHHHHTTSS HHHHHHTTGGGGG HHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS SSHHHHHHHHHHHHHHHHTT: ExpBur :bbebbebeebebebbbebbebbeebeebbbbbbbeebbeebebbbbeeebeebbeebbeebbeebbeebeeebeebeebbeebbebbbbbbbbebbbebe: queryA 765:VPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATSTII: 864 : * ** ** *** * *********** ********* ***** * * ********* ***** * * ***** ***************** : 4fkk_A_1 701:LPQCENLAKTLFDQWMSDPENNPIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTLNPDLIRKQDATSTIN: 800 SecStr : HHHHHHHHHHHHHHHT TTS S GGGHHHHHHHHHHH HHHHHHHHHHHHH SHHHHHHHHHHGGG HHHHHHHHHHHT TTTS HHHHHHHHH: ExpBur :beebeebbeebbeebeeeeeeeebebbbbebbbebbbbebeeebbebbbebbeeeeeeebbebbbebbbbbeeeebbeebbeebeeeeebeeebbbebbb: queryA 865:SITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTE: 964 :** ***** * ************ ************** ****** * ********** * ******************************* ** *: 4fkk_A_1 801:SIASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDVGFGSGTRALEQALEKTKANIKWVKENKEVVLNWFIE: 900 SecStr :HHHHSTTHHHHHHHHHHHHTTTTTTSSSSS HHHHHHHHSTT SHHHHHHHHHHHGGGTTT GGGTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbebeebbebbbebbeeebebbeebeeeeebebeebbebbbebbbeeebbeebeebeeeeeeeebbebeebbeebbeebeebbebbeebeeebbebbee: queryA 965:NS: 966 : *: 4fkk_A_1 901:HS: 902 SecStr :H : ExpBur :eb: |