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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [856 aa] | Endoplasmic reticulum aminopeptidase 1 :ERAP1_HUMAN | |
2 | b | E 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 703S(P) 707L 950W (identity: 66.7 %/36.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6t6r_A_1 identity=36.1% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGS-: 169 :** *** * * ** * * * * * ** ** * * * ** * * * * : 6t6r_A_1 49:WNKIRLPEYVIPVHYDLLIHAQLTT-----LTFWGTTKVEITASQPTSTIILHSHHL-----QISRATLRKGAGERLSEEPLQVLEHPRQEQIALLAPEP: 138 SecStr : SS SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS SEEEEE SS -----EEEEEEEEES GGG EEEE EEEEETTTTEEEEE SS : ExpBur :beeeebbeebebeebbbbbebebee-----ebbebbbebebebeeebeebbbbbbeb-----ebeebbbeeeeeeeeeebebeebeeeebbbbbbebeee: queryA 170:LVKDSQYEMDSEFEGELADDLAGFYRSEYM--EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVT: 267 :* * * * *** * * ** * * ** ** ******** ** * * * *** * * * : 6t6r_A_1 139:LLVGLPYTVVIHYAGQLSETFHGFYKSTYRTKEGELR-ILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNM-PLVKSVTVAEGLIED--: 234 SecStr : TT EEEEEEEEEE BSSSSEEEEEEEE TT EE-EEEEEE TTTTGGGTS B STTS BEEEEEEEE TTSEEEESS- EEEEEE STT EEE--: ExpBur :beeeeebebbbebbbebbebbbbbbebebebeeeeee-ebbbbbbbbbbbbbbbbbbbbbebbbbbbbbbebeeebebbbbb-eeeeeeeeeeebbbb--: queryA 268:EFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSL: 367 : * * ****** *** * * * * ** * * * **** * * ****** * *** ******** **** *: 6t6r_A_1 235:HFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI--NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRESAL: 332 SecStr :EE SB GGG EEEE EEEEEE TT EEEEEE GGGG--GG HHHHHHHHHHHHHHHHHHT SSEEEEEEESS SSSEE TTEEEEEGGGT: ExpBur :ebeebeebbbbbbbbbbbebeeeeeebeeebebbbbbbeebb--ebbebbbebbbebbbbbbebbebebebebbbbbbbbbbbeebbbbbbbbbbbbebb: queryA 368:LFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQ: 467 :*** ** * * ************** ************* * * * * **** **** *** ***: 6t6r_A_1 333:LFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALQSSHPVSTP---VENPAQ: 428 SecStr : TTT HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG GGGGT-HHHHHHHHHHHTSTT SS --- SHHH: ExpBur :bbeeeebbbeeebebbbebbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeebb-bbebbebbebbbbebbbebbbe---beebee: queryA 468:ISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGT---LSQE: 564 :* * ** ** *** * ** ** * ** * ** * ** *** * ** **** *** ** * * **: 6t6r_A_1 429:IREMFDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMA-SIXXXGVD----VKTMMNTWTLQKGFPLITI-TVRGRNVHMKQE: 522 SecStr :HHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHTTTEEE HHHHHHHHH-T --- TT----HHHHHHHHHSS S EEEEE-EEETTEEEEEEE: ExpBur :bbbbbbebbebbbbbbbbbbeeebeeeebeebbbebbeebeeebbebeebbebbe-ee---eeb----beebbebbbeeebbbbbbb-beeeeebebebe: queryA 565:HFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQIIND: 664 :* * * ** * * * * ** * *** * * * * * * ** ** : 6t6r_A_1 523:HYM----KGXXXXXXXGYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINN: 617 SecStr :E ---- ------- EEEEEEETTEEEEEEEEE SSE-EEEE SS S EEESGGG SS EEEETTTHHHHHHHHHHHHGGGS HHHHHHHHHH: ExpBur :bbe----ee-------eeebbbbbbbbbeeeeeeeeeebeeee-eebebeeeeebbbbbbbbebbbbbbbeeebbeebbebbeeebeebeebbbbbbbbb: queryA 665:AFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTAC: 761 :** * * * ** * * * ** * * *** * ** * * * * **: 6t6r_A_1 618:AFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI-----DKQTWTD-EGSVSERMLRSQLLLLAC: 711 SecStr :HHHHHHTTSS HHHHHHHHGGGGG HHHHHHHHHHHHHHHHHHTTSS HHHHHHHHHHHHHHHHHHH-----HH SSS- S HHHHHHHHHHHHHHH: ExpBur :bbbbbbeeebebeebbebbebbeebeebbbbebbbebbeebbbbbbbeebeebbeebbebbbebbeebb-----eebebee-eeebeebbbbbebbbbbb: Contact : b b queryA 762:SNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATS: 861 : * * * * * * * * * *** * ** * * * * * : 6t6r_A_1 712:VHNYQPCVQRAEGYFRKWKE--SNGQLSLPVDVTLAVFAVGAQSTEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKGDKIKTQEFPQ: 809 SecStr :HTT HHHHHHHHHHHHHHHH--TTT S HHHHHHHHHHHTTSHHHHHHHHHHHTT HHHHHHHHHHHTT HHHHHHHHHHHHHTSSS GGGHHH: ExpBur :ebebeebbeebebebeebee--eeeeeebebbbbbbbbbbbbeeeebbebbbeebeebebbbbeebbbebbbbbeeeebbeebbebbeeeeebbbbbbbe: queryA 862:TIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQW: 961 : * * * * * * ** ** ** * * *** * * * ** * * * ** * * *: 6t6r_A_1 810:ILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKEN--GSQLRCVQQTIETIEENIGWMDKNFDKIRVW: 907 SecStr :HHHHHHHSTTTHHHHHHHHHHHHHHHHHHH TT HHHHHHHHHHHTT SHHHHHHHHHHHHHTGGG--TTT HHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :bbbbbbebeebbebbbebbeeebeebbeebebbbebbeebbbbbbebbbeeeebeebeebbeebeee--bbebebbebbbbbbebbbebbeebbeebeeb: Contact : b queryA 962:F: 962 : : 6t6r_A_1 908:L: 908 SecStr :H: ExpBur :b: |