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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [429 aa] | Zinc metalloprotease :Q9RVZ5_DEIRA | |
2 | b | E 1 (A) | non-polymer(NA) | SODIUM ION | 229M(D) 230K(P) (identity: 0.0 %/34.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6iff_A_1 identity=34.4% |
queryA 218:RKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVTEFHTTPKMSTYLLAFIVSEFDY-------VEKQASNGVLIRIWARPSAIA: 310 :* ** * * * * * * * * * * ** * ** * * * : 6iff_A_1 172:RGFLPCNDHPSDPATFTVRVTVPASASAAASGL----FTTQTERNGLKTLTFTQRVPVPTYALGLIVGPLERRTAPDVQLGTQTVHRRDIYAAGLPAGTT: 267 SecStr :GGTS B STTS EEEEEEEEEETT EEEESSE----EEEEEEETTEEEEEEEEEEEE GGG EEEESEEEEEEEEEEETTEEEEEEEEEETT TT : ExpBur :bbbbbbbbbbbbebebbbebbbeeebbbbbbbe----eeeeeeeeeebbbbbbbeeebbbbbbbbbbbebeeeeeeebebeeeebebbbbbbeeeeeebe: Contact : bb queryA 311:AGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLN: 410 : * * * * *** * * * ** * ** *** * ******* ** * * ** : 6iff_A_1 268:VPEGETARMLR--VLSDWFG----PYP-DEVYGVALLPVRQLALETAGLTTM-----------PATSNRERVRL---HALAHQWFGDQVTLADWADTWLS: 346 SecStr : TTHHHHHHH--HHHHHH ----S S-SSEE EEEESS B TTSEEE-----------EGGG HHHHH---HHHHHTTBTTTB BSSGGGTHHH: ExpBur :beeebbbebbe--bbbebbb----ebb-bebbbbbbbebeeeebbbbbbbbb-----------bbebbeeebbb---bbbbbbbbbbebbbeebbbbbbb: queryA 411:EGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTF: 507 :**** * * * ** * * * * * ** * * *** * ** * * * * * ** **: 6iff_A_1 347:EGFATYAELL---WAESQGEDGQAMA-ADWYARLSV---LPSRPLRATREE--------EIFDASAYFRGALALHALRLKVGDAAFGQFLHSYVKTF: 428 SecStr :HHHHHHHHHH---HHHHTT HHHHH-HHHHHHHHT---S SS SGG--------GTTSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHT: ExpBur :bbbbbbbbbb---bbeeeeeebeebb-eebeeebee---eebbebebeeee--------bbbeebbebbbbbbbbbbbeeeeeeebbebbeebbeeb: |