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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [889 aa] | M1 family aminopeptidase :AMP1_PLAFQ | |
2 | b | E 1 (A) | non-polymer(MG) | MAGNESIUM ION | 330G(D) (identity: 0.0 %/28.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3t8v_A_1 identity=28.5% |
queryA 134:GHRVVLRGVG-GSQPPDIDKTELVEPTEYL----VVHLKGSLVKDSQYEMDSE--FEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDE: 226 :* * *** * *** ** * * ** * * * * * * * * * * : 3t8v_A_1 46:GEDLVFDGVGLKINEISINNKKLVEGEEYTYDNEFLTIFSKFVPKSKFAFSSEVIIHPETNYALTGLYKS--------KNIIVSQCEATGFRRITFFIDR: 137 SecStr :S EEEE S EEEEEEETTEE BTTTEEE SSEEEE GGGS SSSEEEEEEEEE GGG TT SEEEEE--------TTEEEEE TTTTGGGTS B S: ExpBur :eeebebbbeebeeeebbbeeeebeeeebbeeeeeebbbeeeebeeeebbbbbebbbebeebebbbbbbeb--------eebbbbbbbbebbbebbbbbbe: queryA 227:PAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNW-NVTEFHTTPKMSTYLLAFIVSEFD-----YVEKQASNGVLIRIWARPSAIAAGHGDYALNV: 320 :* * * * * * * * * * * ** * * * * ** : 3t8v_A_1 138:PDMMAKYDVTVTADKEKYPV--LLSNGDKVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQ--WALEC: 233 SecStr :TT EEEEEEEEEETTT E--EEESSEEEEEEEETTTEEEEEEEEEEEE GGG EEEE EEEEEEEEE SSS EEEEEEEEEGGGGGG H--HHHHH: ExpBur :bbbbbebbbbbbbeeeebee--bbbbeeeeeeeeeeeebbbbebebeeebbbbbbbbbbbebeeeeeebebeeeeeebebebbbeeebeebbb--bbbbb: queryA 321:TGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYL: 420 : * * * *** ***** ** **** * * ** ** ** ** ** * * * ** * *: 3t8v_A_1 234:LKKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTLRDWFQLTLKEGLTVHRENL: 333 SecStr :HHHHHHHHHHHH SSEEEEEEES SSSEE TTEEEEEGGGT TTTS THHHHHHHHHHHHHHHTTTBTTTBEESSGGGHHHHHHHHHHHHHH: ExpBur :beebbebbbebbebbbeeeebbbbbbbbbbebbbbbbbbbbbbbebbbbbbeebbbebbeebbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbbbbbbbb: Contact : b queryA 421:GADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYL: 504 : * * * * * * *** * * ** * ** * * * * * : 3t8v_A_1 334:FSEEMTKTVTTR----LSHVDLLRSVQFLEDSSPLSHPIRP-ESYVSMANFYTTTVYDKGSEVMRMYLTILGEEYYKKGFDIYI: 412 SecStr :HHHHHH THHH----HHHHHHHHHHHHHHHTSTT SS -SEES GGGG SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :bbeeebebebbb----bebbbebbbbbbbbbebbbbbbbbb-eebebbebbebbbbebbbbbbbbbbbebbeeeebeebbeebb: |