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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [902 aa] | Aminopeptidase N :AMPN_PIG | |
2 | b | D 1 (D) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 84S 85Y 86R(N) 110R 234N 271T (identity: 83.3 %/79.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6buy_A_1 identity=79.8% |
queryA 67:QSKAWNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHL: 166 :*** ******* ** **** ********** *** *** * *** * * ************** *** ******* ** * ** ***** ********: 6buy_A_1 1:QSKPWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYT-TQGHMVVLRGVGDSQVPEIDRTELVELTEYLVVHL: 99 SecStr : GGGSSS SSEEEEEEEEEEEE S SSS EEEEEEEEEEEESS EEEEEEE S EE - SSSS EEEESTT EEEEEEETTTTEEEEEE: ExpBur :eeeebeeeebeebbebebbebebbbebeeeeeeebebebebebebebeeebebbbbbbbebebe-beeeebebeeeeebebbebeebeebeebbbbbbbb: Contact : bbb b queryA 167:KGSLVKDSQYEMDSEFEGELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNV: 266 :**** *** *** ******************** ** ****** **************** ******** ******* *** **** ***** *: 6buy_A_1 100:KGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSV: 199 SecStr :EEEE TT EEEEEEEEEEE SSSSEEEEEEEEETTEEEEEEEEE TTTTGGGTS B STTS BEEEEEEEEETTSEEEESS BSSS EE TT TTEEE: ExpBur :eeebeeeeebebbbebebebbeeebbbbbbebeeeeeebbbbbbbbbbbbbbbbbbbbbbbebbbebebbbbbeeebebbbbbeeeeeeeebeeeeebbb: Contact : b queryA 267:TEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENS: 366 :*** *** ******* ***** * * *********** *** *** ************** ** * ********* ******************** : 6buy_A_1 200:TEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENA: 299 SecStr :EEB SB GGG EEEES EEEEEE TTS EEEEEE HHHHHTTTTHHHHHHHHHHHHHHHHHTTS SSSEEEEEEETT TT EE TTEEEEEHHH: ExpBur :bebeebeebbbbbbbbbbbebeebeeebeeebebebbbebebbeeebbebbbebbbebbebbeebbebebbbebbbbbbbbebeeebbbbbbbbbbebeb: Contact : b queryA 367:LLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINTPA: 466 :***** *** ************************ ********************* ********** * ***************** *** * ****: 6buy_A_1 300:LLFDPQSSSISNKERVVTVIAHELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPA: 399 SecStr :H TTT HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTS GGGGHHHHTHHHHHHHHTSTT S GGG SHH: ExpBur :bbbbeebbbbebebebbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbbeebbeebebeebbbbebbbebbeebbeeebebbbbeeeebebee: queryA 467:QISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNR-SIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTLSQEH: 565 :**** ** ********* **** ** ** ** ******* ****** ** ** *** ** ** ** *** ** *************** ** ** *: 6buy_A_1 400:QISEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPVITVDTKTGNISQKH: 499 SecStr :HHHTTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHTTEEE HHHHHHHHHHHHHT SS SS HHHHHHHHHSS S EEEEEETTTTEEEEEE: ExpBur :ebeebeeebbebbbbbbbbbbbebbeeebbeebbbbbbeebeeeebebeebbebbbebbeeeeeeeeeeebeebbbbbbebbbbbbbebebeebebbbeb: queryA 566:FLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV-RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQIIND: 664 :**** ***** * * * ***** ** * * *** ** ****** * ***** ***** ***** *** ** *** * ******** * *: 6buy_A_1 500:FLLDSESNVTRSSAFDYLWIVPISSIKNGVMQDHYWLRDVSQAQNDLFKTASDDWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYD: 599 SecStr : SSTT S TTTT EEE EEETTEE EEE SSSEEE GGG SS EEESGGG SS EEEE HHHHHHHHHHHHH GGGS HHHHHHHHHH: ExpBur :bbbeeeeeeeeebeeebbbbbbbbbbbeeeeeeebbbeeeeeeeeebbebeeeebbbbbbebbbbbbbbbbeebbeebbebbeeebeebebbbbbbbbbb: queryA 665:AFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNG: 764 : **** ** ******* ***** * **** ********* ************* ** *** *** ** * ** * ********** **********: 6buy_A_1 600:SFNLATAHMVPVTLALDNTLFLNGEKEYMPWQAALSSLSYFSLMFDRSEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNG: 699 SecStr :HHHHHHTTSS HHHHHHTTGGGGG SHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHHHHHHTTTTTS SSHHHHHHHHHHHHHHHHTT: ExpBur :bbebbebeebebebbbbbbebbeebeebbbbbbbeebbeebebbbbeeebeebbeebbeebbeebbeebeeebeebeebbeebbebbbbbbbbebbbebe: queryA 765:VPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNPDLIRKQDATSTII: 864 : * ** ** *** * *********** ********* ***** * * ********* ***** * * ***** ***************** : 6buy_A_1 700:LPQCENLAKTLFDQWMSDPENNPIHPNLRSTIYCNAIAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTLNPDLIRKQDATSTIN: 799 SecStr : HHHHHHHHHHHHHHHH TTS S GGGHHHHHHHHHHHS HHHHHHHHHHHHH SHHHHHHHHHHGGG HHHHHHHHHHTT TTTS GGGHHHHHH: ExpBur :beebeebbeebbeebeeeeeeeebebbbbebbbebbbbeeeeebbebbbebbeeeeeeebbebbbebbbbbeeeebbeebbeebeeeeebeeebbbebbb: queryA 865:SITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTE: 964 :** ***** * ************ ************** ****** * ********** * ******************************* ** *: 6buy_A_1 800:SIASNVIGQPLAWDFVQSNWKKLFQDYGGGSFSFSNLIQGVTRRFSSEFELQQLEQFKKNNMDVGFGSGTRALEQALEKTKANIKWVKENKEVVLNWFIE: 899 SecStr :HHHHSTTHHHHHHHHHHHT TTSTTTTTSS HHHHHHHHHTT SHHHHHHHHHHH SSS GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :ebbebeebbebbbebbeeebebbeebeeeeebebeebbebbbebbbeeebbeebeebeeeeeeeebeebeebbeebbeebeebbebbeebeeebbebbee: queryA 965:NS: 966 : *: 6buy_A_1 900:HS: 901 SecStr :H : ExpBur :eb: |