#WARNING:no index is registered index "YP_009725307.1" in "https://rest.uniprot.org/uniprotkb/" url "https://rest.uniprot.org/uniprotkb/YP_009725307.1.txt".
Please visit the UniProt website(https://www.uniprot.org), and get a proper ID/AC for your query protein.
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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(queryA) | A 1 (A) | polymer(polypeptide(L)) [927 aa] | RNA-directed RNA polymerase :R1AB_SARS2 | |
2 | b | H 1 (T) | polymer(polyribonucleotide) | Template RNA | 408Q 496N 500K 501S 507N 541Q 543N 545K 557V 558A 559G 569R 577K 580A 590G 592S 594F 595Y 682S 683G 684D 685A 686T 687T 689Y 860V 861S 864I 914R 915Y 920F 924M (identity: 100.0 %/100.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7rdy_A_1 identity=100.0% |
queryA 3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102 :****************************************************************************************************: 7rdy_A_1 3:DAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFF: 102 SecStr : TTHHHHHHHTTS EEEESSSSS EE EEESSS EEE EE S EEEEE TTS EEEEEEE B HHHHHHHHHHHHHSTT SSB EEEE: ExpBur :eeeebbeebbeebebebeeeeeeeeeeebebbebeeeeebbbbbbbebeebbbbbbbeeeeeeeebbbbbbbeeeebbeebeebbeebeebebbbebbbb: queryA 103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202 :****************************************************************************************************: 7rdy_A_1 103:KFRIDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIV: 202 SecStr :EEESSSSEEEEEEEEEE SSBHHHHHHHHHS TTS HHHHHHHHHTTSS SSGGGSTTTT TTT TTHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTEE: ExpBur :ebebeeeeebbbbbbebbbbbbbbbbbbbbbbeeeebebbeebbeebebbeeebbeeebbbbbbebeebbebbbebbeebbebbeebbebbebbeebbbe: queryA 203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302 :****************************************************************************************************: 7rdy_A_1 203:GVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCL: 302 SecStr :EE GGGBBTTS B SS EE STT EE HHHHHHHTTHHHHTTTTTTSSBGGG TTS B TT HHHHHHHHHHSSTT S SSGGG S: ExpBur :bebbbbbbbbebbbbebeebeeeeeeebebebbbbbbbbbbbbbbbebbebbbbeeeeeeeeeeeeeeeeeebbeebeebbeebbeebebebbbbbeebe: queryA 303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402 :****************************************************************************************************: 7rdy_A_1 303:DDRCILHCANFNVLFSTVFPPTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALT: 402 SecStr :STTSHHHHHHHHHHHTTSS GGG B EEEEEETTEEEEEE EEEETTTEEEE S SEE HHHHHHHHHSHHHHHHTSEE TT SS EEEE S: ExpBur :ebbbbbbbbbbbbbbbebbeeebbbebeeebebeeeeeebbbbbbbebbbbbebeeeeeebeebeebeebbbebbbbeeeeeeeebebeebebebebbee: queryA 403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502 :****************************************************************************************************: 7rdy_A_1 403:NNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSA: 502 SecStr :SS B EE HHHHHHHHHTT S TT SS B B STTHHHHGGGGGG HHHHHHHHHHHHHHT S TTS S S SB : ExpBur :eeeeeeebeeeeebeebeebbeeeebbeeebebeeebebeebeeebbbebbbebebbeebbbbbbbbbbbbbbbbebbeebebbebebeebebeeeeeeb: Contact : b b bb queryA 503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602 :****************************************************************************************************: 7rdy_A_1 503:GFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKFYGGWHNML: 602 SecStr : TTGGGT BHHHHHHHS HHHHHHHHHHHTTS EEEEEE BSS S EEEE HHHHHHHHHHHHHHHHHHTT SSSSB SS STTTHHHHHH: ExpBur :bbbbeeeeebeebbeebeeeebeebbebbbebbbbbbbebebeeebbeeeebebebebbbbbbbbbebbbbebbebbeeeeebbbbbebeeeebbbbebb: Contact : b b b b bbb b b b b b bb queryA 603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702 :****************************************************************************************************: 7rdy_A_1 603:KTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTA: 702 SecStr :HHHTSS SSEEEEE TTHHHH HHHHHHHHHHTTSS SSSS HHHHHHHHHHHHHHTTS EEE SS EEE SS TTSSSSHHHHHHHHHHHHHHH: ExpBur :eebbeebeeeebbbbebbebebbbbbbbbbbbbbbbbbbbeeebeeeebbbbbbbbbbbbbbbbbbbebbbbebebbbbeebebeebbbbbbbbbbbbbb: Contact : bbbbbb b queryA 703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802 :****************************************************************************************************: 7rdy_A_1 703:NVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTE: 802 SecStr :HHHHHHSS SSS HHHHHHHHHHHHHHHS SS HHHHHHHHHHHHHHEEEEEETTEEEEEEEHHHHHHTSS HHHHHHHHHHHHS TTS EEE: ExpBur :bbbbbbebbbeebeeeebeebbbebbebbbeeeeeeeebbeebbebbeebbbbbbebeebbbbbbeebbeeebbbbbebbbbbbbbbbbbbbeeeebbeb: queryA 803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902 :****************************************************************************************************: 7rdy_A_1 803:TDLTKGPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDM: 902 SecStr : GGG S BTTBEEEEEEETTEEEEEEE HHHHHHHHHEESSGGGGSSTT SHHHHHHHHHTGGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHS: ExpBur :eebeebbeebeebebbebebeeeebbbbbbebbebbbbbbbbeeeeeeebbeebeebbebbbebbbbeebeeeebbebbebbbebbeebbeeeeeeeeee: Contact : bb b queryA 903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 :***************************: 7rdy_A_1 903:YSVMLTNDNTSRYWEPEFYEAMYTPHT: 929 SecStr :SSS SS GGGTTSHHHHHTTSSTT : ExpBur :eeeeeeeeebeeebeeeebeebbeeee: Contact : bb b b |