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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [398 aa] | Endoplasmic reticulum aminopeptidase 1,LPF sequence :ERAP1_HUMAN | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [396 aa] | Endoplasmic reticulum aminopeptidase 1,LPF sequence :ERAP1_HUMAN | 594G(K) 618E 619W 640R(D) 641K(S) 644T(G) 645Q(L) 648R(G) 649D(T) 650H 651S(T) 688E(H) 737T(K) 766P(Q) 767E(P) 770E(Q) 960Q(V) (identity: 17.6 %/27.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7mwc_D_1 identity=27.3% |
queryA 548:GFPVITVDTSTGT---LSQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQT: 644 :*** ** * * *** * * ** * * * * ** * *** * * * : 7mwc_D_1 1:GFPLITI-TVRGRNVHMKQEHY----XXXXXXXXXXXYLWXVPLTFITSKSDMVHRFLLXTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDDGWDSLTG: 94 SecStr : EEE-EEETTEEEE --------------- - EEEESTTSS EE - -EE SS S EEE SSS EE HHHHHHHHHH: ExpBur :ebbbbbb-eeeeeebebebeee---------------eee-bebbbbbbeeeeeeebeb-eee-eeeebeeebebbbbebebeeebbbbbeeeebeebbe: Contact : b bb bb b queryA 645:QLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFRNNTNNWR: 741 : * * * ** ** ** * * * ** * * * ** * * *** * ** * * * * : 7mwc_D_1 95:LLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI-----DKQTWT: 189 SecStr :HHHHHGGGS HHHHHHHHHHHHHHHHHTSS HHHHHHHHTTGGG SHHHHHHHHHHHHHHHHHHHTSS HHHHHHHHHHHHHHHHHHH-----TT S : ExpBur :bbeeebeebeeebbbbbbebbbebbeeeebebeebbebbbbbeebeebebbeebbebbeebbebbbbeebeebbeebbebbbebbeebb-----eeeebe: Contact :b bbbb b b queryA 742:EIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWIL: 841 : ** * * * * * * * * * *** * ** *: 7mwc_D_1 190:DXG-SVSERMLXSQLLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVF--AVGAQSTEGWDFLYSKYQFSXSSTEKSQIEFALCRTQNKEKL: 286 SecStr : - - HHHHH - HHHHHHHHTT TTTTTHHHHHHHHHHTTTS S TTTHHHHH--HHHTTSHHHHHHHHHHHHH - HHHHHHHHHHH HHHH: ExpBur :e-e-eeeeeeb-bebbbbbbebebeebbeebebebeebeeeeeeeebbebbbbbbb--bbbbeeeebbebbbebbeee-eeeeeebbbebbbebeeeebb: Contact : bb b queryA 842:NRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQAL: 941 : * * * * * * * * * * ** ** ** * * *** * * * * * * : 7mwc_D_1 287:QWLLDESFKGDKIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKEN--XSQLRCVQQTI: 384 SecStr :HHHHHHHHHSSSS GGGHHHHHHHHHHSTTTHHHHHHHHHHTHHHHHHHH SS HHHHHHHHHHHTT HHHHHHHHHHHTT TT --- HHHHHHH: ExpBur :eebbebbeeeeebeeebbbebbbbbbebbebbebbbebbeeebeebbeebeeeeeebbebbebbbbbbbeeeebeebeebbeebeeb---eeeebbebbb: queryA 942:EKTKANIKWVKENKEVVLQWF: 962 :* ** * * * : 7mwc_D_1 385:ETIEENIGWMDKNFDKIRVWL: 405 SecStr :HHHHHHHHHHHHHHHHHHHHH: ExpBur :eebeebbebbeebeeebeebb: Contact : b |