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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | C 1 (C) | polymer(polypeptide(L)) [800 aa] | Endoplasmic reticulum aminopeptidase 1 :ERAP1_HUMAN | |
2 | b | I 1 (C) | non-polymer(ZN) | ZINC ION | 355E 388H 392H 411E (identity: 100.0 %/34.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3qnf_C_1 identity=34.3% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNY---TLSQGHRVVL--RGVGGSQPPDIDKTELVEPTEYLVVH: 165 :** *** * * ** * * * * * ** ** * ** * * * * * * * * : 3qnf_C_1 55:WNKIRLPEYVIPVHYDLLIHANLTT-----LTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAXXXLSEEPLQVLEHPRQEQIALLAP-EPLLVG: 148 SecStr : SS TTEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS EEEEEEE S EEEEEEEEE --- EEEEEEEEEEGGGTEEEEEEE-EEE BT: ExpBur :beeeebbeebebebbebbbebebee-----eebbbebebebebeeebebbbbbbeebeeeebbbebee---eeeeebeeeeeeeeebbbbebe-eebeee: queryA 166:LKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYM--EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM-LPKGPSTP--LPE: 260 :* * * * *** * * ** * * ** ** ******** ** * * * *** * * * *: 3qnf_C_1 149:LPYTVV--------IHYAGNLSETFHGFYKSTYRTKEGELR-ILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEGLIE: 239 SecStr : EEEEE--------EEEEEE BSSSSEEEEEEEE TTS EE-EEEEEE TTTTGGGTS B STTS BEEEEEEEE TT EEEESS EEEEEEEETTEEE: ExpBur :eebebb--------bbbebebbeeeebbbbbebeeeeeeee-ebbbbbbbeebbbbbbbbbbbbebbbebbbbbebeeebebbbbbeeeeeeeeeeeebb: queryA 261:DPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLV: 360 :* * * ****** *** * * * * ** * * * **** * * ****** * *** ******** : 3qnf_C_1 240:D------HFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI--NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLT: 331 SecStr :E------EE SB GGG EEEE EEEEEE TT EEEEEE TTTG--GGGHHHHHHHHHHHHHHHHHHTS SSSEEEEEEETT SSEE TTEE: ExpBur :b------bbeebeebbbbbbbbbbbbbeeeeeebeeebebbbbbbeeeb--eebebbbebbbebbebbbebbebebebebbbbbbbeebeeebbbbbbbb: Contact : b queryA 361:TYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPAS: 460 :**** **** ** * * ************** ************* * * * * **** **** *** : 3qnf_C_1 332:TYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALNSSHPVSTP--: 428 SecStr :EEEGGGT TTT SSSHHHHHHHHHHHHHHHHBTTTBEESSGGGHHHHHHHHHHHHHHHHHHH GGG HHHHH-HHHHHHHHHHHSSTT SS --: ExpBur :bbbbebbbebeeebbeeeebebbbebbbbbbbbbbbbbbbbbbbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbeeebeebbee--: Contact : b b b queryA 461:EINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQE--------------------AVNNRSIQLPTTVRDIM: 540 : * ** *** * ** ** * ** * ** * ** *** * *: 3qnf_C_1 429:-VENPXXXXXXXXDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKTMM: 527 SecStr :- S -------- HHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTTTSEE HHHHHHHHTT ----------------------------- HHHHH: ExpBur :-eeee--------eeeeebbbbbbbbbbebbeeeebeebbbebbeebeebbbebbebbebbeee-----------------------------eebeebb: queryA 541:NRWTLQMGFPVITVDTSTGT---LSQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEE: 637 :* **** *** ** * * *** * * ** * * * * ** * *** * * : 3qnf_C_1 528:NTWTLQKGFPLITI-TVRGRNVHMKQEHYM----KXXXXXXXTGYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDD: 621 SecStr :HHHHHS S EEEEE-EEETTEEEEEEEE ---- ------- EEEEEEESS S EEEEE SSE-EEEE SS S EEESGGG SSSEEEE TT: ExpBur :ebbbebbbbbbbbb-beeeeebebebebbe----e-------eeeebbbbbbbbbeeeeeeeeebbeeee-eebebeeebebbbbbbbbbbbbbbbbeee: queryA 638:NWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFR: 734 : * * * * ** ** ** * * * ** * * * ** * * *** * ** * * * : 3qnf_C_1 622:GWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI----: 717 SecStr :HHHHHHHHHHHHGGGS HHHHHHHHHHHHHHHHTTSS HHHHHHHHGGGGG SHHHHHHHHHHHHHHHHHHTTSS HHHHHHHHHHHHHHHHHHH----: ExpBur :ebeebbebbeeebeebeebbbbbbbbbbbbbbeeeebebebbbebbebbbebeebbbbebbbebbeebbebbbbeebeebbeebbebbbebbbebb----: queryA 735:NNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALAC: 834 : * ** * * * * * * * * * *** * ** : 3qnf_C_1 718:-DKQTWTD-EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVF--AVGAQSTEGWDFLYSKYQFSLSSTEKSQIEFALCR: 813 SecStr :-HT SSS- S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTTT S HHHHHHHH--HHHTSSHHHHHHHHHHHHT SHHHHHHHHHHHS: ExpBur :-eebebbe-eebbbebebbbebbbbbbebebeebeeebeeebeebbeeebeeebbebbbbbbb--bbbbeeeebbeebeeeeeeeeeebbbebbeebbbb: queryA 835:SKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGT: 934 : * * * * * * * * * * *** * : 3qnf_C_1 814:TQNKEKLQWLLXXXXXXXXXXXXXXXQILTLIGRNPVGYPLAWQFLRKXXXXXXXXXXXXXXSIAHMVMGTTNQFSTRTRLEEVKGXXXXXXXX--XXXX: 911 SecStr : S HHHHHHH --------------- HHHHHHHSSSSHHHHHHHHH -------------- THHHHTTTT SHHHHHHHT --------------: ExpBur :beeeebbeeee---------------eebeebbebeebbebbbeeeee--------------eeeebeeebbebbbbeebeeebee--------------: queryA 935:RALEQALEKTKANIKWVKENKEVVLQWF: 962 : * * ** * * * : 3qnf_C_1 912:XXXQQTIETIEENIGWMDKNFDKIRVWL: 939 SecStr :--- TTHHHHHHHHHHHHHHHHHHHHHH: ExpBur :---eebeebbeebbebbeebbeebeebb: |