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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [866 aa] | Leucyl-cystinyl aminopeptidase :LCAP_HUMAN | |
2 | b | YA 1 (B) | non-polymer(BR) | BROMIDE ION | 489S(T) 490F(Y) 589T(S) 603I(V) (identity: 0.0 %/36.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5mj6_B_1 identity=36.5% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGSL: 170 :* *** * * * * ** * ** * * ** ** * ** ** * * *: 5mj6_B_1 9:WAQIRLPTAVVPLRYELSLHPNLTS-----MTFRGSVTISVQALQVTWNIILHSTGHNIS-----RVTFMSAVSSQEKQAEILEYAYHGQIAIVAPE-AL: 97 SecStr : SS SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS EEEEEEE SEEEE-----EEEEEETTT EEE EEEEEGGGTEEEEEEEE-EE: ExpBur :eeeeebbebbebeebebebebebee-----eebebbbbbbbebeeebeebbbbbeebebe-----ebbbebeeeeeeeebebbeeeebbbbbbebee-eb: queryA 171:VKDSQYEMDSEFEGELADDLAGFYRSEYM-EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLPEDPNWNVTEF: 269 : * * *** * * * * * ** ** ******** ** * * * ****** ** * * * **: 5mj6_B_1 98:LAGHNYTLKIEYSANISSSYYGFYGFSYTDESNEKKYFAATQFEPLAARSAFPCFDEPAFKATFIIKIIRDEQYTALSNM-PKKSSVVL--DDGLVQDEF: 194 SecStr : TT EEEEEEEEEEE BSSSSEEEEEEEE TT EEEEEEEE TTTTGGGTS B STT BEEEEEEEEETTSEEEESS- EEE B --TTSEEEEEE: ExpBur :eeeeebebebebebebeeebebbbbbebebeeeeebebbbbbbbbbbbbebbbbbbbbebbbbbbbebbbeeebebbbbb-eeeeeeee--eeebbebbb: queryA 270:HTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRENSLLF: 369 : ****** **** * * ** * * * * * * *** * * ** *** * * *** ********* * ** ** : 5mj6_B_1 195:SESVKMSTYLVAFIVGEMKNL-SQDVNGTLVSIYAVPEKIGQVH--YALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREETLLY: 291 SecStr : SB GGG EEEE EEE-EEESSS EEEEEE GGGGGGGH--HHHHHHHHHHHHHHHHH SEEEEEEESS SSSEE TTEEEEEGGGT : ExpBur :eebeebbbbbbbbbbbbbeee-eeeeeebebbbbbbeebbebbe--bbbebbbebbebbbebbebebebebbbbbbbbbbbeebbbbbbbbbbbbbbbbb: queryA 370:DPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDV----YRVMAVDALASSHPLSTPASEINTP: 465 :* ** * *************** ************ ** * * * * * * **** * * : 5mj6_B_1 292:DSNTSSMADRKLVTKIIAHELAHQWFGNLVTMKWWNDLWLNEGFATFMEYFSLEKI-----FKELSSYEDFLDARFKTMKKDSLNSSHPIS---SSVQSS: 383 SecStr : TTT HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH----- GGG THHHHHHHHHHHHHHHTSTT SS--- SH: ExpBur :eeebbbbebebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeee-----beebbbebebbebbbebbebbbbebbbebb---bebeee: queryA 466:AQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTL--SQ: 563 : ** * ** ** ** * * ** ****** *** * *** * * * * * **** *** ** * *: 5mj6_B_1 384:EQIEEMFDSLSYFKGSSLLLMLKTYLSEDVFQHAVVLYLHNHSYASIQSDDLWDSFNE-VTNQTLD----VKRMMKTWTLQKGFPLVTVQKKGKELFIQQ: 478 SecStr :HHHHHTSSHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHHTTEEE HHHHHHHHHH-TS TT ----HHHHHHHHHHSSS EEEEEEEETTEEEEEE: ExpBur :eebbbbbbebbeebbbbbbbbbbeebeeeebbebbbebbeebeeeebebeebbebbee-bbeeebe----beebbebbbebebbbbbebeeeeeebebeb: Contact : bb queryA 564:EHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNE--WVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVINRAQI: 661 :* * * * * * ** * * ** * * *** * * * ** ** : 5mj6_B_1 479:ERFFLNXXXXXXXXXX-SYLWHIPLSYVTEGRNYSKYQSVSLLDKKSGVINLTEEVLWVKVNINMNGYYIVHYADDDWEALIHQLKINPYVLSDKDRANL: 577 SecStr :EE ----------- EEEEEEEEETTS EEEEEEEE SSEEEEE SS EEEEEESGGG SSSEEEE HHHHHHHHHHHHH GGGS HHHHHHH: ExpBur :ebbeee-----------eeebebbbbbbbbbeeeeeeeeeeebeeeeeebebeeebebbbbbbebbbbbbbbbeeebbebbbebbeeebeebebebbbbb: Contact : b b queryA 662:INDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNN----------TNNWREIPENLMDQY: 751 :** * ** *** * * * * ** * * * * ** * * * ** * : 5mj6_B_1 578:INNIFELAGLGKVPLKRAFDLINYLGNENHTAPITEALFQTD---LIYNLLEKLGYM-DLASRLVTRVFKLLQNQIQQQTWTDEGTPSMRELRSALLE--: 671 SecStr :HHHHHHHHTTTSS HHHHHHHGGGGGG HHHHHHHHHHHH---HHHHHHHHHT H-HHHHHHHHHHHHHHHHHHHT SS S HHHHHHHHHHHH--: ExpBur :bbbbbbbbbbeebebebbbebbebbeebeebbbbebbbebbe---bbbbbbbbeeee-ebbbebbbbbbebbeebbeebebeeeeebbebebbeebbe--: queryA 752:SEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSYTLNP: 851 : ** * ** ** ** * * * * *** * * ** : 5mj6_B_1 672:-------FACTHNLGNCSTTAMKLFDDWMASNGTQSLPTDVMTTVF--KVGAKTDKGWSFLLGKYISIGSEAEKNKILEALASSEDVRKLYWLMKSSLNG: 762 SecStr :-------HHHHTT TTHHHHHHHHHHHHHHTTT S TTTHHHHH--HHHTTSHHHHHHHHHHHHH HHHHHHHHHHHTT S HHHHHHHHHHHHHT: ExpBur :-------bbbebebeebeeebeeebeebbeeeeeeebebbbbbbbb--bbbbeeeebbebbbebbeeeebbbbbbbbbebbbbbeeeebbeebbebbbee: queryA 852:DLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKANIKWV: 951 :* * * * * * **** ** ** ** * * *** * * * * * *** ** * : 5mj6_B_1 763:DNFRTQKLSFIIRTVGRHFPGHLLAWDFVKENWNKLVQKFPLGSYTIQNIVAGSTYLFSTKTHLSEVQAFFENQSEATF--RLRCVQEALEVIQLNIQWM: 860 SecStr :SSS GGGHHHHHHHHHHSGGGHHHHHHHHHHTHHHHHHHS TT HHHHHHHHHHHTT SHHHHHHHHHHHHTT HHHH--TSHHHHHHHHHHHHHHHHH: ExpBur :eebebbbbbbbbebbbeeeebbebbbebbeeebeebeeebebbbebbbbbbebbbebbbeeeebeebeebbeeeeeebb--ebebbebbbeebeebbbbb: queryA 952:KENKEVVLQWF-TENSK: 967 : * * ** * : 5mj6_B_1 861:EKNLKSLTWWLRTETSQ: 877 SecStr :HHHHHHHHHHTTTS S: ExpBur :eebbeebeeebeebeee: |