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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [849 aa] | Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN | |
2 | b | Q 1 (B) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 649D(N) 652A(L) (identity: 0.0 %/35.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5k1v_B_1 identity=35.8% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLS--QGHRVVLRG--VGGSQPPDIDKTELVEPTEYLV: 163 :* *** * * * ** * * * ** ** *** * * ** * * * * * * * : 5k1v_B_1 64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157 SecStr : SSS SSEEEEEEEEEEEEETTTTE-----EEEEEEEEEEESS SB EE SS EEEEEEEEESSSGGG SS B EETTTTEE B S-S : ExpBur :eeebebbebbebebbebbbebebeeee-----bebebebbbebeeeeeebbbbbeebeeeebebebeebeebeeebeebebbebeeebbbbbebe-eebe: queryA 164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259 : *** * * * * *** * * * * * ** ******* ** * * ***** ** * : 5k1v_B_1 158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248 SecStr :TT --------EEEEEEEEEE BSSSSSSEEEEEE TTS EEEEEE TTTTGGGTS B SSSS BEEEEEEEE TT EEEESS- EEEE TTS : ExpBur :eebe--------bbbbbebeeebeeebbbbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbebebeeebebbbbb-eeeeeeeeeeee: queryA 260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358 : ** * ** ****** * ** * * ** * * * * *** * * * *** * * * *** *******: 5k1v_B_1 249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340 SecStr :EEE------EE SB GGG EEEE EEEEEE TT EEEEEE GGGSGGGH--HHHHHHHHHHHHHHHHHT SSEEEEEEESS SSSEE SS: ExpBur :bbb------bbeebeebbbbbbbbbbbbbeebebebeeebebbbbbbbebeebbe--bbbebbbebbebbbebbebebebebbbbbbbbbbbeebbbbbb: queryA 359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458 :* **** ****** ** * * * **************** ***** ** **** * * * * ** * * * ** * * *: 5k1v_B_1 341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLKEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439 SecStr :EEEEEGGGT TTT HHHHHHHHHHHHHHHHHTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG HHHHT-HHHHHHHHHHHSSSS SS : ExpBur :bbbbbbebbbbeeebbbbeeebebbbbbbbbbbbbbbbbbbbbebbbbbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbbebbbebbee: queryA 459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRD: 538 :* ** ** * ** ** *** * ** ** * * * ** * * * ** * * : 5k1v_B_1 440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNXXXXXXXXXXXXXXXXXXXXXXXXXXXGENAEVKE: 536 SecStr : --- SHHHHHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHTTEEE HHHHHHHHH --------------------------- SHHHHH: ExpBur :b---eeebebbbbbbebbebbbbbbbbbbbebbeeeebbebbbebbeebbeebbebeebbbbbee---------------------------eeeeebee: queryA 539:IMNRWTLQMGFPV--ITVDTSTGTLSQEHFLLDPDSNVTRPSEF--NYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNY: 634 : * **** * * ** ** * * * * * ** * *** * *: 5k1v_B_1 537:MMTTWTLQKGIPLXXXXXXXXXXXXQQERFLQXXXXXXXXXXXXXERYLWHIPLTYXXXXXXVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYIVHY: 635 SecStr :HHHHHSSS S B ------------ B ------------- ------ SS - SS S SGGG SS : ExpBur :bbebbbebebbbb------------ebebbee-------------eeeebbbbebe------eeeeeebeeee-eeeeeeeeeeeebebbbbebbbbbeb: queryA 635:DEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTPLFI: 731 : * *** * * * * * * * ** * * * ** * * * ** * * ** * : 5k1v_B_1 636:EGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVI-: 734 SecStr : SSHHHHHHHHHHS GGGS HHHHHHHHHHHHHHHHHSSS HHHHHHHTTTTTT HHHHHHHHHHHHHHHHHHHHSS HHHHHHHHHHHHHTT HHH-: ExpBur :eeeebeebbebbeeebeebeebbbbbbbbbbbbbbeeeebebeebbebbebbeebeeebbbebbbebbeebbebbebeeeeebbebbeebbbeebeebb-: Contact : b b queryA 732:HFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAA: 831 : * * ** * ** **** * ** * ** * * *: 5k1v_B_1 735:----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKILYA: 827 SecStr :----HH SSS- S HHHHHHHHHHHHHHHTTT HHHHHHHHHHHHHHHHTTS S HHHHHHHH--HHTTSSHHHHHHHHHHHHH S HHHHHHHHHH: ExpBur :----eeeebbe-eeebbebebbeebbbbbbebebeebeeebeebbeebeebeeeeebebbbbebbb--bbbbeeeebbebbbeebeebbbbbbbebbbbb: queryA 832:LACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFG: 931 :* ** * * * * ** * **** ** * ** * * ** ** * * *: 5k1v_B_1 828:LSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ--G: 925 SecStr :HTS HHHHHHHHHHHHHTSSS GGGHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHS SS HHHHHHHHHHHSS HHHHHHHHHHHHHTTTT--T: ExpBur :bbbbeeeebbeebbebbbebeebbbbbbbebbebbbeeeebbebbbebbeeebeebeeebeebbebbbebbebbbebbbbeebeeebeebbeebeee--b: queryA 932:SGTRALEQALEKTKANIKWVKENKEVVLQWFTENS: 966 :* ** **** * * * : 5k1v_B_1 926:SHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNT: 960 SecStr : HHHHHHHHHHHHHHHHHHHTSHHHHHHHHHT : ExpBur :eebebbebbbbbbeebbebbeebbeebeebbeeee: |