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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [854 aa] | Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN | |
2 | b | O 1 (B) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 310A(N) (identity: 0.0 %/35.9 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4jbs_B_1 identity=35.9% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLSQGHRVVLRGVGGSQP----PDIDKTELVEPTEYLV: 163 :* *** * * * ** * * * ** ** *** * * ** * * * * * * : 4jbs_B_1 64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEXXXXXXXPGKELKVLSYPAHEQIALLVP-EKLT: 157 SecStr : SSS SSB EEEEEEEEETTTTE-----EEEEEEEE BSS SEEEEE S EEEEEEEEE ------- EE EEEEETTTTEEEEE S-S : ExpBur :eeeeebbeebebebbebbbebebeeee-----bebebebebebeeebebbbbbbeebeeeebebeee-------eeeebeebeeeeebbbbbebe-eebe: queryA 164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259 : *** * * * * *** * * * * * ** ******* ** * * ***** ** * : 4jbs_B_1 158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248 SecStr :TT --------EEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B STTSEEEEEEEEEE TT EEEESS- EEEEEE TTS : ExpBur :eeee--------bebbbebeeebbeebbbbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbebebeeebebbbbb-eeeeeeeeeeee: queryA 260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358 : ** * ** ****** * ** * * ** * * * * *** * * * *** * * * *** *******: 4jbs_B_1 249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340 SecStr :EEE------EE SEEGGG EEEE EEEEEE SS EEEEEE STTGGGHH--HHHHHHHHHHHHHHHHH SSEEEEEEESS SSSEE TT: ExpBur :bbb------bbeebeebbbbbbbbbbbebeebebebeeebebbbbbbbebeebbe--bbbebbeebbebbbebbebebebebbbbbbbbbbbeebbbbbb: Contact : b queryA 359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458 :* **** ****** ** * * * **************** ***** ** **** * * * * ** * * * ** * * *: 4jbs_B_1 341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLKEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439 SecStr :EEEEETTTT TTT HHHHHHHHHHHHHHHHHHHBTTTEEESSTTSTHHHHHHHHHHHHHHHHHH GGG HHHHH-HHHHHHHHHHHSSTT SS : ExpBur :bbbbbbebbbbbeebbbbebebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbbebbbebbee: queryA 459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRD: 538 :* ** ** * ** ** *** * ** ** * * * ** * * * ** * * : 4jbs_B_1 440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEVKE: 536 SecStr : --- SHHHHHHT STTTTHHHHHHHHHHHHTT HHHHHHHHHHHHHHTTTEEE HHHHHHHHH ----------------------------- TH: ExpBur :b---eeeeebbbbbbebbebbbbbbbbbbbeebeeeebeebbbebbeebeeebbebebbbebbbee-----------------------------eebee: queryA 539:IMNRWTLQMGFPVI--TVDTSTGTLSQEHFL--LDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNY: 634 : * **** * * * * ** ** * * * * * ** * *** * *: 4jbs_B_1 537:MMTTWTLQKGIPLLXXXXDGCSLRLQQERFLQGVXXXXXXXXXXXERYLWHIPLTXXTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYIVHY: 635 SecStr :HHHHHHTS S ---- SB B ----------- B -- S B SS -B B SS S SGGG SS : ExpBur :bbebbbebebbbbb----eeeebebbbebbebee-----------eeeebebbbb--eeeeeeeeeeebeeee-eebebeeeeebebbbbbbebbbbbbb: queryA 635:DEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTPLFI: 731 : * *** * * * * * * * ** * * * ** * * * ** * * ** * : 4jbs_B_1 636:EGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVI-: 734 SecStr :TTTHHHHHHHHHHTTGGGS HHHHHHHHHHHHHHHHTTSS HHHHHTTTSGGGT HHHHHHHHHHHHHHHHHHHHSS SGGGHHHHHHHHSSHHHH-: ExpBur :eeeebebbbebbeeebeebeebbbbbbbbbbbbbbbeeeeebebbbebbebbeebebbbbbbbbbebbeebbebbeeeeeeebbebbbebbbeebeebb-: queryA 732:HFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAA: 831 : * * ** * ** **** * ** * ** * * *: 4jbs_B_1 735:----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKILYA: 827 SecStr :----HH SSS- S HHHHHHHHHHHHHHHTTT HHHHHHHHHHHHHHHHHTS S HHHHHHHH--HHHTTSHHHHHHHHHHHHT S HHHHHHHHHH: ExpBur :----eebebee-eeebbeebbbeebbebbbebebeebeeebeebbeebeeeeeeeebebbbbebbb--bbbbeeeebbebbbebbeebebbbbeebbbeb: queryA 832:LACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFG: 931 :* ** * * * * ** * **** ** * ** * * ** ** * * *: 4jbs_B_1 828:LSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ--G: 925 SecStr :HHT SHHHHHHHHHHHHH SSS GGGHHHHHHHHTTSGGGHHHHHHHHHHSHHHHHHHS TTSHHHHHHHHHHHTT SHHHHHHTTTHHHHT ST--T: ExpBur :bbbbeeeebbeebbebbbeeeebebbbbbebbebbbeeeebbebbbebbeeebeebeeebebbbebbbbbbebbbebbbbeeebeebeebbeebeee--b: queryA 932:SGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967 :* ** **** * * * : 4jbs_B_1 926:SHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 961 SecStr : HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH : ExpBur :eebebbebbebebebbbebbeebbebbeebbeeeee: |