CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [872 aa] | Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN | |
2 | b | J 1 (J) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 115E(N) (identity: 0.0 %/36.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7pfs_B_1 identity=36.4% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLS--QGHRVVLRG--VGGSQPPDIDKTELVEPTEYLV: 163 :* *** * * * ** * * * ** ** *** * * ** * * * * * * * : 7pfs_B_1 64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157 SecStr : SSS SSSEEEEEEEEEEEETTTTE-----EEEEEEEEEE S EEEEEEE S EEEEEEEEESSSGGG TT EE EEEEEGGGTEEEEEEE-EEE : ExpBur :eeeeebbeebebebbebbbebebeeee-----bebebebbbebeeebeebbbbbeebeeeebbbebeebeebbeeebebeebebeebbbbbbebe-bebe: Contact : b queryA 164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259 : *** * * * * *** * * * * * ** ******* ** * * ***** ** * : 7pfs_B_1 158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248 SecStr :TT E--------EEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B STT B EEEEEE TT EEEESS- EEEEEE TTS : ExpBur :eebe--------bebbbebeeebeeeeebbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbbbebeeebebbbbb-eeeeeeeeeeee: queryA 260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358 : ** * ** ****** * ** * * ** * * * * *** * * * *** * * * *** *******: 7pfs_B_1 249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340 SecStr :EEE------EE SB GGG EEEE EEEEEE TTS EEEEEE GGGGGGGH--HHHHHHHHHHHHHHHHHT SSEEEEEEESS SSSEE TT: ExpBur :bbb------ebeebeebbbbbbbbbbbbbeeeebebeeebebbbbbbbebeebbe--bbbebbeebbebbbebbebebebebbbbbbbbbbeeebbbbbb: queryA 359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458 :* **** ****** ** * * * **************** ***** ******* * * * * ** * * * ** * * *: 7pfs_B_1 341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439 SecStr :EEEEEGGGT TTT HHHHHHHHHHHHHHHHHTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG TTTT-HHHHHHHHHHHTSTT SS : ExpBur :bbbbbbebbbbeeebbbbeeebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbbebbbebbee: queryA 459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRD: 538 :* ** ** * ** ** *** * ** ** * * * ** * * * ** * * : 7pfs_B_1 440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAEVKE: 536 SecStr : --- SHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEE HHHHHHHHS ---------------------------- HHHH: ExpBur :b---eeeeebbbbbbebbebbbbbbbbbbeeebeeebbeebbbebbeebeebbbebeebbebbbee----------------------------eeebbe: queryA 539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFLL-----DPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYR: 631 : * **** * * * * * ** ** ** * * * * * * ** * *** : 7pfs_B_1 537:MMTTWTLQKGIPLLVVKXDGCSLRLQQERFLQGVFQEDPE---WRALQERYLWHIPLTYSXXSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYI: 632 SecStr :HHHHHHSS SEEEEEE - S EEEEEE SS SSSTT---GGGG SS B EE -- SS EE B SSE-E SS S SGGG SSSE: ExpBur :bbebbbebbbbbbbbbb-eeeebebbbbbbbbbbbeeeee---eeebeeeeebbbbbbeb--eeeeeeeebbeeee-eebeeeeeeeeebbbbebebbbb: queryA 632:VNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTP: 728 :* * * * * * * * * * * ** * * ** * * * ** * * ** *: 7pfs_B_1 633:VHYEGHGWDQLXXXLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMXXXLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKP: 732 SecStr :EEESSSSGGG --- S TTS HHHHHHHHHHHHHHHHHTSS SGGGG --- TT HHHHHHHHHHHHHHHHHHHTTT HHHHHHHHHHHHHHTHH: ExpBur :bbbeeeebeee---eeeebeebeeebbbbebbbbbbbbbbeeeebeebbee---eeebeebebbbbebeebbebbebbebeeeeebbeebbeebbeebbe: queryA 729:LFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKL: 828 : * * ** * ** **** * ** * ** * * : 7pfs_B_1 733:VI-----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKI: 824 SecStr :HH-----HH SSS- S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHHTS S GGGHHHHH--HHTTSSHHHHHHHHHHHHH S HHHHHHH: ExpBur :bb-----eebebee-eeebbebbbbeebbebbbeeeeeebeeebeebbeebeeeeeeeebbbbbbebbb--bbbbeeeebbebbbeebeebbbbbbbebb: queryA 829:RAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEET: 928 : ** ** * * * * ** * **** ** * ** * * ** ** * * : 7pfs_B_1 825:LYALSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ: 924 SecStr :HHHHHT HHHHHHHHHHHHH TTTTGGGHHHHHHHHTTSHHHHHHHHHHHHHSHHHHHHHS SSSHHHHHHHHHHHTT HHHHHHHHTTTTTTTTT: ExpBur :bbbbbbbeeeebbebbbeebbebeebebbbbbebbebbbeeeebbebbbebbeeebeebeeebebbbebbbebbebbbeebbeeebbeebbebbeebeee: queryA 929:GFGSGTRALEQALEKTKANIKWVKENKEVVLQWF: 962 : ** ** **** * * : 7pfs_B_1 925:--GSHLDIFQTVLETITKNIKWLEKNLPTLRTWL: 956 SecStr :--T THHHHHHHHHHHHHHHHHTTHHHHHT : ExpBur :--ebebebbebbbebbebbbebbeebbeebeeee: |