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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [907 aa] | Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN | |
2 | b | H 1 (H) | branched(oligosaccharide) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 90R(H) 92Y(N) 240P(E) (identity: 0.0 %/36.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7nup_B_1 identity=36.7% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLS--QGHRVVLRG--VGGSQPPDIDKTELVEPTEYLV: 163 :* *** * * * ** * * * ** ** *** * * ** * * * * * * * : 7nup_B_1 64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157 SecStr : SSS SSEEEEEEEEEEEEETTTTE-----EEEEEEEEEEE S SEEEEE SS EEEEEEEEESSSGGG TT EE EEEEEGGGTEEEEE S-S : ExpBur :eeeeebbeebebbbbebbbebebeeee-----bebebebebebeeebeebbbbbeebeeeebebbbeebeebeeeeeebeebebeeebbbbbebe-eebe: Contact : b b queryA 164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259 : *** * * * * *** * * * * * ** ******* ** * * ***** ** * : 7nup_B_1 158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248 SecStr :TTEE--------EEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTGGGGTS B STTSEEEEEEEEEE TT EEEESS- EEEEEE TTS : ExpBur :eeee--------bebbbebebebeeebebbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbebebeeebebbbbb-eeeeeeeeeeee: Contact : b b queryA 260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358 : ** * ** ****** * ** * * ** * * * * *** * * * *** * * * *** *******: 7nup_B_1 249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340 SecStr :EEE------EE SEEGGG EEEE EEEEEE TT EEEEEE GGGGGGGH--HHHHHHHHHHHHHHHHHT SSEEEEEEESS SSSEE TT: ExpBur :bbb------bbeebeebbbbbbbbbbbbbeebebebeeebebbbbbbbebeebbe--bbbebbeebbebbbebbebebebebbbbbbbbbbbeebbbbbb: queryA 359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458 :* **** ****** ** * * * **************** ***** ******* * * * * ** * * * ** * * *: 7nup_B_1 341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439 SecStr :EEEEEHHHH TTT HHHHHHHHHHHHHHHHHHHBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG TTTT-HHHHHHHHHHHTSTT SS : ExpBur :bbbbbbebbbbeeebbbbeeebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeeeb-bebbbebbeebbbebbbebbbe: queryA 459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRS--------------------IQLPTTVRD: 538 :* ** ** * ** ** *** * ** ** * * * ** * * * ** * * : 7nup_B_1 440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHXXXXXTSNMLAFLGENAEVKE: 536 SecStr : --- SHHHHHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHTTTEEE HHHHHHHHHS SS TTTTSSTT ----- TTHHHHHHHHHHHHH: ExpBur :b---eeeeebbbbbeebbebbbbbbbbbbeeebeeeebeebbbebbeebeeebbebeebbebbbebbeeeeeeeeeeee-----eeeeeebeeebeebee: queryA 539:IMNRWTLQMGFPVITV--DTSTGTLSQEHFLL-----DPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYR: 631 : * **** * * * * * ** ** ** * * * * * * ** * *** : 7nup_B_1 537:MMTTWTLQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPE---WRALQERYLWHIPLTYSTSSSNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYI: 632 SecStr :HHHHHHHS S EEEEEEEETTEEEEEEEE SSS TT TT---TTTS SS EEEEEEESS EEEEE SSE-EEEE SS S EEESGGG SSSE: ExpBur :bbebbbeebbbbbbbbeeeeeebebebbbbbbebbeeeee---beeebeebebbbbbbbbbeeeeeeeeebbeeee-eebebeeebebbbbbbebebbbb: queryA 632:VNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTP: 728 :* * * *** * * * * * * * ** * * * ** * * * ** * * ** *: 7nup_B_1 633:VHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKP: 732 SecStr :EEEETTHHHHHHHHHHHHGGGS HHHHHHHHHHHHHHHHHTSS HHHHHHHTTGGGG SHHHHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHTTHH: ExpBur :bbbeeebbeebbebbeeebeebeebbbbbbbbbbbbbbbbbbbebeebbebbebbeebebbbbbbbbbebbeebbebbeeeebeebbeebbebbbebbee: queryA 729:LFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKL: 828 : * * ** * ** **** * ** * ** * * : 7nup_B_1 733:VI-----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKI: 824 SecStr :HH-----HT SSS- S HHHHHHHHHHHHHHHTTT HHHHHHHHHHHHHHHHTTT S GGGHHHHH--HHHHHSHHHHHHHHHHHTT S HHHHHHH: ExpBur :bb-----eebeeee-eeebbebbbbeebbebbbebebeebbeebebbbeebeeeeeeeebbbbbbebbb--bbbbeeeebbebbbebbeebebebbbebb: queryA 829:RAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEET: 928 : ** ** * * * * ** * **** ** * ** * * ** ** * * : 7nup_B_1 825:LYALSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ: 924 SecStr :HHHHTT S HHHHHHHHHHHHHTSSS GGGHHHHHHHHHHSGGGHHHHHHHHHHSHHHHHHHS TTSHHHHHHHHHHHTT HHHHHHHHHHHHHHHHT: ExpBur :bbbbbbbeeeebbeebbebbbebeebebbbbbebbebbbebeebbebbbebbeeebeebeeebebbbebbbbbbebbbebbbbeebeeebeebbeebeee: queryA 929:GFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967 : ** ** **** * * * : 7nup_B_1 925:--GSHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 961 SecStr :--T THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :--ebebebbebbbbbbebbbebbeebbeebeebbeeeee: |