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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [871 aa] | Endoplasmic reticulum aminopeptidase 2 :ERAP2_HUMAN | |
2 | b | G 1 (G) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 90R(H) 91P 92Y(N) 239H(R) 240P(E) (identity: 20.0 %/36.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7p7p_B_1 identity=36.2% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKL---NYTLS--QGHRVVLRG--VGGSQPPDIDKTELVEPTEYLV: 163 :* *** * * * ** * * * ** ** *** * * ** * * * * * * * : 7p7p_B_1 64:WQELRLPSVVIPLHYDLFVHPNLTSLD-----FVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYPAHEQIALLVP-EKLT: 157 SecStr : SSS SS EEEEEEEEEEETTTTE-----EEEEEEEEEE SS SEEEEE S EEEEEEEEESSSSSS TT EE EEEEEGGGTEEEEE S-S : ExpBur :ebeeebbebbebbebebbbebebeeee-----bebebebebebeeebeebbbbbeebebeebebebeebeebbeeebebeebebeebbbbbbebe-ebbe: Contact : bbb queryA 164:VHLKGSLVKDSQYEMDSEFEGELADDLAGFYRSEYME-GNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTPLP---: 259 : *** * * * * *** * * * * * ** ******* ** * * ***** ** * : 7p7p_B_1 158:PHLK--------YYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNM-PKVKTIELEGGL: 248 SecStr :TT E--------EEEEEEEEEE BSSSSEEEEEEEE TTS EEEEEEEE TTTTGGGTS B STT BEEEEEEEE TT EEEESS- EEEEEE TTS : ExpBur :eebe--------bebbbebeeebeeebbbbbebebebeeeeeeebbbbbbbbbbbbbbbbbbbbbebbbebbbbbebeeebebbbbb-eeeeeeeeeeee: Contact : bb b queryA 260:-EDPNWNVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWG: 358 : ** * ** ****** * ** * * ** * * * * *** * * * *** * * * *** *******: 7p7p_B_1 249:LED------HFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTH--YALQASLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWG: 340 SecStr :EEE------EE SB GGG EEEE EEEEEE SSS EEEEEE GGGGGGGH--HHHHHHHHHHHHHHHHHT SSEEEEEEESS SSSEE TT: ExpBur :bbb------ebeebeebbbbbbbbbbbebeeeebebeeebebbbbbbeebeebbe--bbbebbeebbebbbebbebebebebbbbbbbbbbbeebbbbbb: queryA 359:LVTYRENSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTP: 458 :* **** ****** ** * * * **************** ***** ******* * * * * ** * * * ** * * *: 7p7p_B_1 341:LITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYF-LNVCFEVITKDSLNSSRPISKP: 439 SecStr :EEEEEHHHH TTT HHHHHHHHHHHHHHHHTTTBTTTBEESSGGGTHHHHHHHHHHHHHHHHHH GGG TTTT-HHHHHHHHHHHHSTT SS : ExpBur :bbbbbbebbbbeeebbbeeeebebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebbbeeeb-bebbbebbebbbbeebbbbbee: queryA 459:ASEINTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTT--------------------VRD: 538 :* ** ** * ** ** *** * ** ** * * * ** * * * ** * * : 7p7p_B_1 440:A---ETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCXXXXXXXXXXXXXXXXXXXXXXXXXXXNAEVKE: 536 SecStr : --- SHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEE HHHHHHHHHT --------------------------- HHHH: ExpBur :b---eeeeebbbbbbebbebbbbbbbbbbeeeeeeebbeebbbebbeebeeebbebebbbbbbbeee---------------------------eeebee: queryA 539:IMNRWTLQMGFPVITVDTSTGT--LSQEHFLL-----DPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYR: 631 : * **** * * * * ** ** ** * * * * * * ** * *** : 7p7p_B_1 537:MMTTWTLQKGIPLLVVKQXXCSLRLQQERFLQGVFQEDPE---WRALQERYLWHIPLTYSXXXXNVIHRHILKSKT-DTLDLPEKTSWVKFNVDSNGYYI: 632 SecStr :HHHHHHSS S EEEEEE -- EEEEEEE SS SSSHH---HHHH SS EEE ---- EEE SSE-EEE SS S BSGGG SSSE: ExpBur :bbebbbeeebbbbbbbee--eebebebbbbbbbbbeeeee---beeeeeebebbbbbbbe----eeeeeeebeeee-eebeeeeeeeeebbbbbbebbbb: queryA 632:VNYDEENWRKIQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDR---SEVYGPMKNYLKKQVTP: 728 :* * * * * * * * * * * * * * * ** * * * ** * * ** *: 7p7p_B_1 633:VHYEGHGWDXXXXXLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKAXXMTYYLQHETSSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKP: 732 SecStr :EEESS ----- SSGGGS HHHHHHHHHHHHHHHHTTTS GGG -- TTTT HHHHHHHHHHHHHHHHHHHTTT HHHHTTSTTHHHHTTHH: ExpBur :bbbeeeeee-----beeebeeeeeebbbbbbbbebbbbbbebeebeee--eebebeebebeebbebebebbeebbebbeeeeeeebbebebeebeeebee: queryA 729:LFIHFRNNTNNWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKL: 828 : * * ** * ** **** * ** * ** * * : 7p7p_B_1 733:VI-----DRQSWSD-KGSVWDRMLRSALLKLACDLNHAPCIQKAAELFSQWMESSGKLNIPTDVLKIVY--SVGAQTTAGWNYLLEQYELSMSSAEQNKI: 824 SecStr :HH-----HH SSS- S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHHTTSS GGGHHHHH--HHHTTSHHHHHHHHHHHHH HHHHHHH: ExpBur :be-----eebeeee-eeeeeebebbeebbbbbbebebeebeeebeebbeebeeeeeeeebebbbbebbb--bbbbeeeebbebbbeebeebebbbbbebb: queryA 829:RAALACSKELWILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEET: 928 : ** ** * * * * ** * **** ** * ** * * ** ** * * : 7p7p_B_1 825:LYALSTSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ: 924 SecStr :HHHHHS S HHHHHHHHHHHHH SSS GGGHHHHHHHHHSSTTSHHHHHHHHHHTHHHHHTTS TTSHHHHHHHHHHHTT HHHHHHHHHHHHHHTTS: ExpBur :bebbbbbeeeeebebbbeebbebeebebbbbbebbebbbeeeebbeebbebbeeebeebeeebebbbebbbbbbebbbebbbeeebbeebbebbeebeee: queryA 929:GFGSGTRALEQALEKTKANIKWVKENKEVVLQWFTENSK: 967 : ** ** **** * * * : 7p7p_B_1 925:--GSHLDIFQTVLETITKNIKWLEKNLPTLRTWLMVNTR: 961 SecStr :--S SHHHHHHHHHHHHHHHHHHHSTTSSSHHHHT : ExpBur :--ebebebbeebbeebebebbbbebbeeebeeebeeeee: |