CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [856 aa] | Leucyl-cystinyl aminopeptidase :LCAP_HUMAN |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6ydx_A_1 identity=36.4% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGSL: 170 :* *** * * * * ** * ** * * ** ** * ** ** * * *: 6ydx_A_1 40:WAQIRLPTAVVPLRYELSLHPNLTS-----MTFRGSVTISVQALQVTWNIILHSTGHNIS-----RVTFMSAVSSQEKQAEILEYAYHGQIAIVAPE-AL: 128 SecStr : SSS SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEE S BS EEEE S EEE-----EEEE SSS B EEEE SSSEEEEE SS- B: ExpBur :eeeeebbebbebeebbbebebebee-----eebebebebbbebeeebeebbbbbeebeee-----ebbbeeeeeeeeeebeebeeeebbbbbbbbee-eb: queryA 171:VKDSQYEMDSEFEGELADDLAGFYRSEYM-EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNMLPKGPSTP----LPEDPNWN: 265 : * * *** * * * * * ** ** ******** ** * * * ****** ** * * * : 6ydx_A_1 129:LAGHNYTLKIEYSANISSSYYGFYGFSYTDESNEKKYFAATQFEPLAARSAFPCFDEPAFKATFIIKIIRDEQYTALSNM-PKKSSXXXXXGLVQD----: 223 SecStr : TTEEEEEEEEEEEE BSSSSEEEEEEEE SS EEEEEEEE TTTTHHHHS B STT BEEEEEEEESSS EEEESS- B ----- EEE----: ExpBur :eeeeebbbebbbebebeeebebbbbbebebeeeeebebbbbbbbbbbbbebbbbbbbbebbbebebebbeeeebbbbbbb-eeebe-----eeeeb----: queryA 266:VTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYREN: 365 : ** ****** **** * * ** * * * * * * *** * * ** *** * * *** ********* * ** : 6ydx_A_1 224:--EFSESVKMSTYLVAFIVGEMKNLS-QDVNGTLVSIYAVPEKIGQVH--YALETTVKLLEFFQNYFEIQYPLKKLDLVAIPDFEAGAMENWGLLTFREE: 318 SecStr :--EB SB GGG EEEE EEEE-EEETTEEEEEEE TTSGGGGH--HHHHHHHHHHHHHHHHSSS SSEEEEEEESS SSSB TTEEEEEHH: ExpBur :--ebeebbebbbbbbbbbbbebbeee-eebeebebbbbbbeebeebbe--bbbebbbebbebbbeebeeebebebbbbbbbbebbeebbbbbbbbbbbbb: queryA 366:SLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDV----YRVMAVDALASSHPLSTPASE: 461 : ** * ** * *************** ************ ** * * * * * * **** * * : 6ydx_A_1 319:TLLYDSNTSSMADRKLVTKIIAHELAHQWFGNLVTMKWWNDLWLNEGFATFMEYFSLEKI-----FKELSSYEDFLDARFKTMKKDSLNSSHPIS---SS: 410 SecStr :HH TTT HHHHHHHHHHHHHHHHHTTBTTTBEESSGGGGGGTHHHHHHHHHHHHHHH----- GGG THHHHHHHHHHHHHHHHSTT SS--- : ExpBur :bbbbeeeebbbebbbebbbbbbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeee-----beebbbebebbebbbebbeebbbebbbbbe---be: queryA 462:INTPAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQEAVNNRSIQLPTTVRDIMNRWTLQMGFPVITVDTSTGTL: 561 : ** * ** ** ** * * ** ****** *** * *** * * * * **** *** ** *: 6ydx_A_1 411:VQSSEQIEEMFDSLSYFKGSSLLLMLKTYLSEDVFQHAVVLYLHNHSYASIQSDDLWDSFNEVTNQ-----TLDVKRMMKTWTLQKGFPLVTVQKKGKEL: 505 SecStr : SHHHHHTTSSHHHHHHHHHHHHHHHHHS HHHHHHHHHHHHHHTTTSEE HHHHHHHHHHH S-----S HHHHHHHHHHSSS EEEEEEEETTEE: ExpBur :beeeeebbbbbbebbebbbbbbbbbbbeebeeeebeebbeebbeebeeeebebeebbebbbeebee-----eeebbbbbebbbebebbbbbbbeeeebeb: queryA 562:--SQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDV--RAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRKIQTQLQRDHSAIPVIN: 657 : ** * * * * * ** * * ** * * *** * * * ** : 6ydx_A_1 506:FIQQERFFLXXXXXXXXXXX-XYLWHIPLSYVTEGRNYSKYQSVSLLDKKSGVINLTEEVLWVKVNINMNGYYIVHYADDDWEALIHQLKINPYVLSDKD: 604 SecStr :EEEEEE ------------- EEEEEEEEETT EEEEEEEE SSEEEEE SS EEEEESSSSS SSSEEEE HHHHHHHHHHHHH GGGS HHH: ExpBur :ebebeebee-------------eebebbbbbbbbbeeeeeeeeeeebeeeeeebebeeebebbbbbeebbbbbbbbbeeebbeebbebbeeebeebebeb: queryA 658:RAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSLSYFKLMFDRSEVYGPMKNYLKKQVTPLFIHFRNN----------TNNWREIPENL: 747 :** ** * ** *** * * * * ** * * * * ** * * * ** *: 6ydx_A_1 605:RANLINNIFELAGLGKVPLKRAFDLINYLGNENHTAPITEALFQTD---LIYNLLEKLGYM-DLASRLVTRVFKLLQNQIQQQTWTDEGTPSMRELRSAL: 700 SecStr :HHHHHHHHHHHHHHTSS HHHHHHHTT GGG HHHHHHHHHHHH---HHHHHHHHTT H-HHHHHHHHHHHHHTHHHHHT SS SSHHHHHHHHHH: ExpBur :bbbbbbbbbbbbebeebebbebeebbebbeebeebbbbebbbebbb---ebbbbbbbeeee-ebbeebbebbbeebeebbeeeebeeeeeebebebbbeb: queryA 748:MDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKELWILNRYLSY: 847 : ** * ** ** ** * * * * *** * * : 6ydx_A_1 701:LE---------FACTHNLGNCSTTAMKLFDDWMASNGTQSLPTDVMTTVF--KVGAKTDKGWSFLLGKYISIGSEAEKNKILEALASSEDVRKLYWLMKS: 789 SecStr :HH---------HHHHTT TTHHHHHHHHHHHHHTTTT S HHHHHHHH--HHHHTSHHHHHHHHHHHHH HHHHHHHHHHHHT HHHHHHHHHH: ExpBur :be---------bbbebebeebeeebeebbeebeeeeeeeebebbbbbbbb--bbbbeeeebbebbbebbeebebbbbbebbbebbbbbeeeebbeebbeb: queryA 848:TLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALEQALEKTKAN: 947 : ** * * * * * * **** ** ** ** * * *** * * * * * *** *: 6ydx_A_1 790:SLNGDNFRTQKLSFIIRTVGRHFPGHLLAWDFVKENWNKLVQKFPLGSYTIQNIVAGSTYLFSTKTHLSEVQAFFENQSEATF--RLRCVQEALEVIQLN: 887 SecStr :HHHTSSS GGGHHHHHHHHHHSSTTHHHHHHHHHHTHHHHHHHS TT HHHHHHHHHHHTT HHHHHHHHHHHHHH HHHH--TSHHHHHHHHHHHHH: ExpBur :bbeeeebbbbbbbbbbebbbbbeebbebbbebbeeebeebeebbebbbebbbbbbebbbebbbeeeebeebeebbeeeeeebb--ebebbebbbeebeeb: queryA 948:IKWVKENKEVVLQWF: 962 :* * * * : 6ydx_A_1 888:IQWMEKNLKSLTWWL: 902 SecStr :HHHHHHHHHHHHHHS: ExpBur :bebbeebbeebeeeb: |