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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(AMPN_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [856 aa] | Endoplasmic reticulum aminopeptidase 1 :ERAP1_HUMAN | |
2 | b | Z 1 (A) | non-polymer(EDO) | 1,2-ETHANEDIOL | 458P 462I(V) 463N(E) 467Q (identity: 50.0 %/36.1 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6ryf_A_1 identity=36.1% |
queryA 71:WNRYRLPNTLKPDSYRVTLRPYLTPNDRGLYVFKGSSTVRFTCKEATDVIIIHSKKLNYTLSQGHRVVLRGVGGSQPPDIDKTELVEPTEYLVVHLKGS-: 169 :** *** * * ** * * * * * ** ** * * * ** * * * : 6ryf_A_1 4:WNKIRLPEYVIPVHYDLLIHANLTT-----LTFWGTTKVEITASQPTSTIILHSHHL-----QISRATLRKXXXXRLSEEPLQVLEHPRQEQIALLAPEP: 93 SecStr : SS SSEEEEEEEEEEEEETTT-----TEEEEEEEEEEEESS SEEEEE SS -----EEEEEEEE ---- EEE EEEEETTTTEEEEE SS : ExpBur :beeeebbeebebebbbbbbebebee-----eebebbbebebebeeebebbbbbbbeb-----eeeebbbee----eeeeeebeeeeeeebbbbbbebeee: queryA 170:LVKDSQYEMDSEFEGELADDLAGFYRSEYM--EGNVRKVVATTQMQAADARKSFPCFDEPAMKAEFNITLIHPKDLTALSNM-LPKGPSTP--LPEDPNW: 264 :* * * * *** * * ** * * ** ** ******** ** * * * *** * * * ** : 6ryf_A_1 94:LLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELR-ILASTQFEPTAARMAFPCFDEPAFKASFSIKIRREPRHLAISNMPLVKSVTVAEGLIED---: 189 SecStr : TT EEEEEEEEEE BSSSSEEEEEEEE TTS EE-EEEEEE TTTTGGGTS B STTS BEEEEEEEE TT EEEESS EEEEEEEETTEEEE---: ExpBur :beeebebebbbebebebbebbbbbbebebebeeeeee-ebbbbbbbbbbbbbbbbbbbbbebbbbbbbebebeeebebbbbbeeeeeeeeeeebbbb---: queryA 265:NVTEFHTTPKMSTYLLAFIVSEFDYVEKQASNGVLIRIWARPSAIAAGHGDYALNVTGPILNFFAGHYDTPYPLPKSDQIGLPDFNAGAMENWGLVTYRE: 364 : * * ****** *** * * * * ** * * * **** * * ****** * *** ******** ****: 6ryf_A_1 190:---HFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKI--NQADYALDAAVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRE: 284 SecStr :---EE SB GGG EEEE EEEEEE TTS EEEEEE GGGG--GG HHHHHHHHHHHHHHHHHHS SSEEEEEEESS SSSEE TTEEEEEG: ExpBur :---ebeebeebbbbbbbbbbbebeeeeeebeeebebbbbbbeebb--ebbebbbebbbebbebbbebbebebebebbbbbbbbbbbeebbbbbbbbbbbb: queryA 365:NSLLFDPLSSSSSNKERVVTVIAHELAHQWFGNLVTIEWWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVDALASSHPLSTPASEINT: 464 : **** ** * * ************** ************* * * * * **** **** *** : 6ryf_A_1 285:SALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTMEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYF-FGKCFDAMEVDALNSSHPVSTP---VEN: 380 SecStr :GGT TTT HHHHHHHHHHHHHHHHTTTBTTTEEESSGGGTHHHHHHHHHHHHHHHHHH GGG GGGGH-HHHHHHHHHHHTSTT SS --- S: ExpBur :ebbbbeeeebbbebebebbbebbbbbbbbbbbbbbbbebbebbbbbbbbbbbbbbbbbeebbeebebeebb-beebbebbebbbbebbbebbbe---bee: Contact : b bb queryA 465:PAQISELFDAISYSKGASVLRMLSSFLSEDVFKQGLASYLHTFAYQNTIYLNLWDHLQE--------------------AVNNRSIQLPTTVRDIMNRWT: 544 :**** * ** ** *** * ** ** * ** * ** * ** *** * ** **: 6ryf_A_1 381:PAQIREMFDDVSYDKGACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDVKTMMNTWT: 480 SecStr :HHHHHHTSSHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHTTTEEE HHHHHHHHHT ----------------------------- HHHHHHHHH: ExpBur :bbebbbbbbebbebbbbbbbbbbeeebeeeebeebbbebbeebbeebbebeebbebbeee-----------------------------eebeebbebbb: Contact : b queryA 545:LQMGFPVITVDTSTGT---LSQEHFLLDPDSNVTRPSEFNYVWIVPITSIRDGRQQQDYWLIDVRAQNDLFSTSGNEWVLLNLNVTGYYRVNYDEENWRK: 641 :** *** ** * * *** * * ** * * * * ** * *** * * * : 6ryf_A_1 481:LQKGFPLITI-TVRGRNVHMKQEHYM----KGXXXXXDTGYLWHVPLTFITSKSDMVHRFLLKTKT-DVLILPEEVEWIKFNVGMNGYYIVHYEDDGWDS: 574 SecStr :SS S EEEEE-EEETTEEEEEEEE ---- ----- EEEEEEETTEEEEEEEEE SSE-EEEE SS S EEESGGG SS EEEETTTHHHH: ExpBur :ebbbbbbbbb-beeeeebebebebbe----ee-----eeeeebbbbbbbbbeeeeeeeeeebeeee-eebebeeeeebbbbbbebebbbbbbbeeebbee: queryA 642:IQTQLQRDHSAIPVINRAQIINDAFNLASAHKVPVTLALNNTLFLIEERQYMPWEAALSSL-SYFKLM--FDRSEVYGPMKNYLKKQVTPLFIHFRNNTN: 738 : * * * ** ** ** * * * ** * * * ** * * *** * ** * * * : 6ryf_A_1 575:LTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLI-----DKQ: 669 SecStr :HHHHHHHHGGGS HHHHHHHHHHHHHHHHTTSS HHHHHHHHGGGGG HHHHHHHHHHHHHHHHHHHTSS HHHHHHHHHHHHHHTHHHH-----HH : ExpBur :bbebbeeeeeebeebbbbbbbbbbbbbbbeeebebeebbebbbbbeebeebbbbbbbbebbbebbbbbbbeebeebbeebbebbbebbeebb-----eeb: queryA 739:NWREIPENLMDQYSEVNAISTACSNGVPECEEMVSGLFKQWMENPNNNPIHPNLRSTVYCNAIAQGGEEEWDFAWEQFRNATLVNEADKLRAALACSKEL: 838 : * ** * * * * * * * * * *** * ** : 6ryf_A_1 670:TWTD-EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWKESNGNLSLPVDVTLAVF--AVGAQSTEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNK: 766 SecStr : SSS- S HHHHHHHHHHHHHHHHTT HHHHHHHHHHHHHHHHTTT HHHHHHHH--HHHTTSHHHHHHHHHHHTT HHHHHHHHHHHTT S H: ExpBur :ebee-eeebeebbbbbebbbbbbebebeebbeebebebeebeeeeeeeebbbbbbbbbb--bbbbeeeebbebbbeebeebebbbbeebbbebbbbbeee: queryA 839:WILNRYLSYTLNPDLIRKQDATSTIISITNNVIGQGLVWDFVQSNWKKLFNDYGGGSFSFSNLIQAVTRRFSTEYELQQLEQFKKDNEETGFGSGTRALE: 938 : * * * * * * * * * * * ** ** ** * * *** * * * ** * : 6ryf_A_1 767:EKLQWLLDESFKGDKIKTQEFPQILTLIGRNPVGYPLAWQFLRKNWNKLVQKFELGSSSIAHMVMGTTNQFSTRTRLEEVKGFFSSLKEN--GSQLRCVQ: 864 SecStr :HHHHHHHHHHHHTSSS GGGHHHHHHHHHTSTTTHHHHHHHHHHTHHHHHHHH TT HHHHHHHHHHHTT SHHHHHHHHHHHHTTGGG--TTT HHHH: ExpBur :ebbeebbeebeeeeebebbbbbebbbbbbebbebbebbbebbeebbeebbeebebbbebbeebbebbbebbbeeebbeebeebbeebeee--beebebbe: queryA 939:QALEKTKANIKWVKENKEVVLQWF: 962 :* * ** * * * : 6ryf_A_1 865:QTIETIEENIGWMDKNFDKIRVWL: 888 SecStr :HHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :bbbbbbebbbebbeebeeebeebb: |