[pdbjlvh2]Protein Model on 6p71_D_1_N

Protein Model on 6p71_D_1_N_1 (TEMPLATE: 6p71 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]
MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query F)
1	a	F	D 1 (D)	polymer(polypeptide(L)) [1500 aa]	DNA-directed RNA polymerase subunit beta' :RPOC_THET8
2	b		N 1 (D)	non-polymer(UTP)	URIDINE 5'-TRIPHOSPHATE	704R 706P 737N 739D 741D 1029R 1235Q 1238M 1239R 1242H
FOCUSED TEMPLATE
MODEL[1] TEMPLATE:6p71_D_1
6p71_D_1       1:XXKEVRKVRIALASPEKIRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPIKDYECACGKYKRQRFEGKVCERCGVEVTKSIVRRYRMGHIELATPAA: 100
SecStr          :--     EE     HHHHHHH SSB   S  B TTT SB TTSTT HHHH  SBTTB SSSSS STTSSS B TTT  B S GGGGGT  EEEEEEEEEE:    
ExpBur          :--eeeeeeeeebbbbeebeeebeeebeebeebeeeeeebeebbbbbbebbbbeeebebeeeebeeeeeeeeebeebebebbebebbeebbbbbebebbbb:    

6p71_D_1     101:HIWFVKDVPSKIGTLLDLSATELEQVLYFSKYIVLDPKGAILNGVPVEKRQLLTDEEYRELRYGKQETYPLPPGVDALVKDGEEVVKGQELAPGVVSRLD: 200
SecStr          : HHHHHSSS HHHHHHT  HHHHHHHHTTSSEEEEE TT EETTEE  TT EE HHHHHHHHH  EEEEE  TT   SS TT EE TT EEETTEE SS :    
ExpBur          :bbbbbebeebbbbebbebeeeebeebbbbeebbbbebeebebeeeebeeeeebbbeebeebeebeeeebebeeeeebebebeeebeeeeebbeebebebe:    

6p71_D_1     201:GVALYRFPRRVRVEYVKKERAGLRLPLAAWVEKEAYKPGEILAELPEPYLFRAEEEGVVELKELEEGAFLVLRREDEPVATYFLPVGMTPLVVHGEIVEK: 300
SecStr          :EEEEE  EEEEEEEEEEEEEEEEEEESSSB   S B TT EEEE SS EEEE SS EEEEEEE SSSEEEEEEETTEEEEEEEE EEEEE S TT EE T:    
ExpBur          :bbbbbeebebbebbbbeeeebbbbbeeebbeeeeebeeeeebbebeeeeebebeeebebebeeeeeebbbbbeeeeeeebebbbbeebeeebeeeeebee:    

6p71_D_1     301:GQPLAEAKGLLRMPRQVRAAQVEAEEEGETVYLTLFLEWTEPKDYRVQPHMNVVVPEGARVEAGDKIVAAIDPEEEVIAEAEGVVHLHEPASILVVKARV: 400
SecStr          :T EEEEEEEEEE  TTEEEEEEEEEEETTEEEEEEEEEEEEEEEEE  TT EE S TT EE TT EEEE SSSTT EE  SSEEEEEEEESEEEEE EEE:    
ExpBur          :eeebbebeeebebbeebebeebeeeeeeeebebbbebebebeeebebeeebeeebebebebeeeeebbbeeeeeeebebeeebbbebebbbbbbbbebee:    

6p71_D_1     401:YPFEDDVEVSTGDRVAPGDVLADGGKVKSDVYGRVEVDLVRNVVRVVESYDIDARMGAEAIQQLLKELDLEALEKELLEEMKHPSRARRAKARKRLEVVR: 500
SecStr          :EE SS BSS TT EE TT EEEGGGTEE SSSEEEEEETTTTEEEEEE    EEE SHHHHHHHHHT  HHHHHHHHHHHTT SSHHHHHHHHHHHHHHH:    
ExpBur          :bebeeebebeeeeebeeeeebbbeeebebebebebebbeeeebbbbbebeebebebbbebbbebbeebebeebbeebeeebeeeeeeebeebbeebebbb:    

6p71_D_1     501:AFLDSGNRPEWMILEAVPVLPPDLRPMVQVDGGRFATSDLNDLYRRLINRNNRLKKLLAQGAPEIIIRNEKRMLQEAVDALLDNGRRGAPVTNPGSDRPL: 600
SecStr          :HHHHHT  GGGGEEEEEEE  GGGS EEE TTS EEE HHHHHHHHHHHHHHHHHHHHHTT  HHHHHHHHHHHHHHHHHHHHTTSSSS  B TT   B :    
ExpBur          :bbeeeebebbbbbbebbebebbeebeeeeeeeeeeeeebbbbbbeebbebbeebeebeeeebeeeebbebbebbbebbbbbbbbeeeeeebeeeeeeeeb:    

6p71_D_1     601:RSLTDILSGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKRMALELFKPFLLKKMEEKGIAPNVKAARRMLERQRDIKDEVWDALEEVIHGKVV: 700
SecStr          :  HHHHHSSTTSHHHHHTS    SSEEEEEEEE TTS TTEEEEEHHHHHHHTHHHHHHHHHHSTTSSSHHHHHHHHHSGGG  HHHHHHHHHHTTT  E:    
ExpBur          :ebebebeeeeebebeeeeeeeeeeeeeebebeebeebebebbbbbbebbbebbbeebbeebeeeeebeeeebbeebbeeeeebeeebbebbeebbeeebb:    

6p71_D_1     701:LLNRAPTLHRLGIQAFQPVLVEGQSIQLHPLVCEAFNADFDGDQMAVHVPLSSFAQAEARIQMLSAHNLLSPASGEPLAKPSRDIILGLYYITQVRKEKK: 800
SecStr          :EEE SS  SGGGEEEEEEEEESSS EEE GGGHHHHT  SSS EEEEE   SHHHHHHHHHTSBGGG  B TTT SBSS   HHHHHHHHHHH     SS:    
ExpBur          :bbbbeeebbebbebbbebebbeeeebebbbbbbebbebeeeebebbbebbeeeeebeebeeeebbbebbbbbbbbebbbbbeeebbbbbbebbbeeeeee:    
Contact         :   b b                              b b b                                                           

6p71_D_1     801:GAGLEFATPEEALAAHERGEVALNAPIKVAGRETSVGRLKYVFANPDEALLAVAHGIVDLQDVVTVRYMGKRLETSPGRILFARIVAEAVEDEKVAWELI: 900
SecStr          :S S EESSHHHHHHHHHHTSS TTSEEEETTEEEEHHHHH EESSHHHHHHHHHTTSS TTS EEEEETTEEEEE HHHHHHHHHHHHHHT HHHHHHH :    
ExpBur          :beeeebeeeeebeebeeeeebbbbbebebeeeebbbbeeeeebeeeeebbebeeeeebebbbbbbbebeeeebebbbbbbbbbebbbebbebeebbbebb:    

6p71_D_1     901:QLDVPQEKNSLKDLVYQAFLRLGMEKTARLLDALKYYGFTFSTTSGITIGIDDAVIPEEKKQYLEEADRKLLQIEQAYEMGFLTDRERYDQILQLWTETT:1000
SecStr          : TTS   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT    GGGS   THHHHHHHHHHHHHHHHHHHHHTTSS HHHHHHHHHHHHHHHH:    
ExpBur          :ebeebbeeebbbebbbebbeebebeebbebbbbbbeebeebbeebeeeeeeeebbebeebeeebeebeeebeebeeeeeeeeeeeeebbeebbebbeebb:    

6p71_D_1    1001:EKVTQAVFKNFEENYPFNPLYVMAQSGARGNPQQIRQLCGLRGLMQKPSGETFEVPVRSSFREGLTVLEYFISSHGARKGGADTALRTADSGYLTRKLVD:1100
SecStr          :HHHHHHHHHHHHHH TT HHHHHHHHTSS  HHHHHHHHS  EEEE TTS EEEEEE   TTT   HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eebbebbbebbeeeeeebbbbbbbebbbeeeeeebbbebbbbbbbbeeeeebbeebbebbeeeeeeeebeebbeebeeeeeeebeebeeebeebbebbeb:    
Contact         :                            b                                                                       

6p71_D_1    1101:VTHEIVVREADCGTTNYISVPLFQPDEVTRSLRLRKRADIEAGLYGRVLAREVEVLGVRLEEGRYLSMDDVHLLIKAAEAGEIQEVPVRSPLTCQTRYGV:1200
SecStr          :HHTT EEEES       EEEESEEEETTTTEEEE  HHHHHHHHTT BBSS EEETTEEE TT B  HHHHHHHHHHHHTTS SEEEE  TTT   TTEE:    
ExpBur          :bbbbbbbeeeeeebeeeeebebbeeeeeeeeeeebeeebbbbbbbbbbbbeebebeeeebeebebbebebbeebbebbeeeebeebbbbbbbbbebeebb:    

6p71_D_1    1201:CQKCYGYDLSMARPVSIGEAVGIVAAQSIGEPGTQLTMRTFHTGGVAGAADITQGLPRVIELFEARRPKAKAVISEIDGVVRIEETEEKLSVFVESEGFS:1300
SecStr          :EHHHH EETTTTEE  TT  HHHHHHHHHHHHHHHTTSTTTTT S   S  HHHHHHHHHHHHTT   SSB  B SS  EEEEEE SS EEEEEE SS E:    
ExpBur          :bebbbbbbbbbbeebebbbebbebbbbbbbbbbbbbbeebeeeeebeeeeebeebbebbbebbbbeebeeebebbeeebebeeeeeeeebbbbbeeeeee:    
Contact         :                                  b  bb  b                                                          

6p71_D_1    1301:KEYKLPKEARLLVKDGDYVEAGQPLTRGAIDPHQLLEAKGPEAVERYLVEEIQKVYRAQGVKLHDKHIEIVVRQMMKYVEVTDPGDSRLLEGQVLEKWDV:1400
SecStr          :EEE   TT  BS  TT B  TT BSBSSB  HHHHHHHH HHHHHHHHHHHHHHHHHHTT    HHHHHHHHHHHT EEEEEE  SSS  TT EEEHHHH:    
ExpBur          :eebebeeeeeeebeeeeebebbeebbeebbbbeebbeeebeebbbebbbebbbebbbeeebebbbbbbbbbbbbbbbbbebeeeeeeebbebeebbeeeb:    

6p71_D_1    1401:EALNERLIAEGKTPVAWKPLLMGVTKSALSTKSWLSAASFQNTTHVLTEAAIAGKKDELIGLKENVILGRLIPAGTGSDFVRFTQVVDQKTLKAIEEARK:1500
SecStr          :HHHHHHHHTTT    EEEE    HHHHHHT S HHHHHHHS HHHHHHHHHHHT EE   SHHHHHHHT   SSGGGSTTTTT     HHHHHHHHHHHH:    
ExpBur          :eeebeebeeeeeeebeeeebbbbbbebbeebebbbbbbbbeebeebbbebbbebeebebebbbbbebeeeeeebeebbeeeeeeeeeeeeeeeeeeeeee:    

6p71_D_1    1501:EA--------------------------------------------------------------------------------------------------:1502
SecStr          :H-:    
ExpBur          :e-:
Protein Model on 6p71_D_1_N_1 (TEMPLATE: 6p71 )

Input Residue Numbers for Focused Sites
