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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query F) |
1 | a | F | D 1 (A) | polymer(polypeptide(L)) [1411 aa] | DNA-directed RNA polymerase II largest subunit :RPB1_YEAST | |
2 | b | R 1 (A) | non-polymer(UTP) | URIDINE 5'-TRIPHOSPHATE | 481D 483D |
FOCUSED TEMPLATE |
MODEL[1] TEMPLATE:2yu9_D_1 |
2yu9_D_1 1:XXGQQYSSAPLRTVKEVQFGLFSPEEVRAISVAKIRFPETMDETQTRAKIGGLNDPRLGSIDRNLKCQTCQEGMNECPGHFGHIDLAKPVFHVGFIAKIK: 100 SecStr :-- SS EE HHHHHHH S S SSS SS SSSS TTT SSS S STTS TTT EEEEEEEEEE GGGHHHHH: ExpBur :--eeeeeeeeeeeeeebeeebebbeebeeebebebeeeebeeeeeeeeebebbbebebbbeeeeeebeeeeebeeebebeebbbebeebbbbbebbebbe: 2yu9_D_1 101:KVCECVCMHCGKLLLDEHNELMRQALAIKDSKKRFAAIWTLCKTKMVCETDVPSXXXXXXLVSRGGCGNTQPTIRKDGLKLVGSWKXXXXXXXXXXXXLR: 200 SecStr :HHHTTB TTT SBS SSSTTTTHHHH STTHHHHHHHHTTSS B S B ------ B S B EETTEE ------------ : ExpBur :ebbbbbbbeebebbbbeeeeebeebeeeeeeeebbeebbeebeeeeebeeebee------eeeeeeeeeebbebeeeeeebbbbee------------ee: 2yu9_D_1 201:VLSTEEILNIFKHISVKDFTSLGFNEVFSRPEWMILTCLPVPPPPVRPSISFNESQRGEDDLTFKLADILKANISLETLEHNGAPHHAIEEAESLLQFHV: 300 SecStr : B HHHHHHHHHSS STTTGGGT BTTTB TTTSEEEEEEE GGGS SSSSS SSTTTTTTTHHHHHHHHTTTSS GGGSSHHHHTTTTTT: ExpBur :ebebeebbebbeebeeebbeebbbeeeebebbbbbbebbebbbbeebeeeeeeeeeebbeebbebbbbbbebbeebeeeeeeeeeeeebeebbeebbebb: 2yu9_D_1 301:ATYMDNDIAGQPQALQKSGRPVKSIRARLKGKEGRIRGNLMGKRVDFSARTVISGDPNLELDQVGVPKSIAKTLTYPEVVTPYNIDRLTQLVRNGPNEHP: 400 SecStr :HHHH SSS SSS SS GGGGTSSSSSTTTTTTSS SSEEEEEEEE TTS TTEEEEETTTTTT EEEEE TTTSHHHHHHHTTTTTSSS: ExpBur :bbbbbbeeeeeebeeeeeeeebebeeebeeeeebebeeeeeeeeeeeebebebeeeeebebebbbbbeebbeebbbebebeeebbeebeebbeebeeebe: 2yu9_D_1 401:GAKYVIRDSGDRIDLRYSKRAGDIQLQYGWKVERHIMDNDPVLFNRQPSLHKMSMMAHRVKVIPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSEETRAE: 500 SecStr : EEEEE SSS EEETTS TTTT TT EEEEE SS EEEE SS STTSEEEEEEEEESSSSEEE TTSTTTTT SSS EEEEE STTTTHH: ExpBur :bbbebbeeeeeebebeeeeebeebebeeebebbbbbbeebbbbbbbeeebbebbebbbebebbeeebbbbbbbbbebbebeeeebebbbebbeeeeebee: Contact : b b 2yu9_D_1 501:LSQLCAVPLQIVSPQSNKPCMGIVQDTLCGIRKLTLRDTFIELDQVLNMLYWVPDWDGVIPTPAIIKPKPLWSGKQILSVAIPNGIHLQRFDEGTTLLSP: 600 SecStr :HHTTSBTTGGGEETTTTEES THHHHHHHHHTSTT EE HHHHHHHHHHSTT S S SSS EEHHHHHTTTS TT EEE SS SS S: ExpBur :beeeebbbebbbbbbbbebbbbbeeebbbbbbbbbeeebebeeebbeebbeebeeeeeeeeebebeeeeebbbbbebbbebbeebbbbeeeeeebeeebe: 2yu9_D_1 601:KDNGMLIIDGQIIFGVVEKKTVGSSNGGLIHVVTREKGPQVCAKLFGNIQKVVNFWLLHNGFSTGIGDTIADGPTMREITETIAEAKKKVLDVTKEAQAN: 700 SecStr :S SEEEESSSEEEE SHHHHSS SSSHHHHHHHHT HHHHHHHHHHHHHHHHHHHHTT GGGS HHHHHHHHHHHHHHHHHHHHHHHHHTTT: ExpBur :ebbbbbbeebebebbbbbeebbbeeeebbbbbbbebebeeebbebbbbbbbbbbbbbeeeeeeeeeebbebeeebeeebeebbeebbeebeebbeeeeee: 2yu9_D_1 701:LLTAKHGMTLRESFEDNVVRFLNEARDKAGRLAEVNLKDLNNVKQMVMAGSKGSFINIAQMSACVGQQSVEGKRIAFGFVDRTLPHFSKDDYSPESKGFV: 800 SecStr : TTS HHHHHHHHHHHHHHHHHHHHHHHHHSS TT HHHHHHHHTSS HHHHHTTTT EE EETTEE BTTBSSTTS TT STTTTTEE: ExpBur :ebeeeeebeeeebbebbbbebbeebbeebbeebeebbeeebebbbeeebebeeeeeebbeebbbbbbbebebebbeeeeeeebbeebeeeeeebebbbbb: 2yu9_D_1 801:ENSYLRGLTPQEFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDNTTRNSLGNVIQFIYGEDGMDAAHIEKQSLDTIGGSDAAFEKRYRVD: 900 SecStr : S TTT HHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHTTTTT EE TTS EE SS EEESSGGGTTB GGGEEEEE TTSS HHHHTTTS : ExpBur :bebeeeeeeeebeebeeebeeeeeeeeeebeeebeebbbbbebbbbbbbbeeebbbeebeeeebbebbbebbbbbbebbebebebbeeeeeebeeebbbb: 2yu9_D_1 901:LLNTDHTLDPSLLESGSEILGDLKLQVLLDEEYKQLVKDRKFLREVFVDGEANWPLPVNIRRIIQNAQQTFHIDHTKPSDLTIKDIVLGVKDLQENLLVL:1000 SecStr :SSSTTSS TTT SSGGGTSS STTHHHHHHHHHHHHHHHHHHHHHSTT EEEEES HHHHHHHHHHHT TTS HHHHHHHHHHHHHH S : ExpBur :beeeeebbeeebbeebeebeeeeebbeebeebbeebeebbeebbeebeebebeeebbbbbebbbbbbeeeeeeeeeeebebebeebbebbeebbeebebb: 2yu9_D_1 1001:RGKNEIIQNAQRDAVTLFCCLLRSRLATRRVLQEYRLTKQAFDWVLSNIEAQFLRSVVHPGEMVGVLAAQSIGEPATQMTLNTFHFAGVASKKVTSGVPR:1100 SecStr : SSSHHHHHHHHHHHHHHHHHHHHS HHHHTTTS STTTHHHHHHHHHHHHHTB TT HHHHHHHHHHTGGGG SS S TTSSS SHHH: ExpBur :eeeeeebeeebeebbeebbbbbbbbbbbbbbbeebbbbeebbeebbeebeebbeebbbeebebbbebbbbbbbebbbebeeebbeebbebbeeebbbbeb: 2yu9_D_1 1101:LKEILNVAKNMKTPSLTVYLEPGHAADQEQAKLIRSAIEHTTLKSVTIASEIYYDPDPRSTVIPEDEEIIQLHFSLXXXXXXXXXXQQSPWLLRLELDRA:1200 SecStr :HHHHHTT SS SS BB BB SSSS TTHHHHHHHHTTS BGGGTEEEEE STTS S TT SSSS SS ---------- S EEEEEE SG: ExpBur :bebbbebeeebeeebbbbebeeeebeeeeebeebbeebbbbbbeebbeeeeeeebeeeeeeebeebeebeeeeeee----------eebeebbbbbbeee: 2yu9_D_1 1201:AMNDKDLTMGQVGERIKQTFKNDLFVIWSEDNDEKLIIRCRVVRXXXXXXXXXAEEDHMLKKIENTMLENITLRGVENIERVVMMKYDRKVPSPTGEYVK:1300 SecStr :GGTTTT HHHHHHHHHHHH SSEEEEE TTSSS EEEEEE --------- GGGTTHHHHHHHHHS B SS TT EEEEE EEE TTSSEEE: ExpBur :bbeebebebeebbeebeeeeeeebebbebeeebeebbbbbbbee---------eeeeeebeeeeeebbeebebbebeebebbbbeeeeeeeeeeebebee: 2yu9_D_1 1301:EPEWVLETDGVNLSEVMTVPGIDPTRIYTNSFIDIMEVLGIEAGRAALYKEVYNVIASDGSYVNYRHMALLVDVMTTQGGLTSVTRHGFNRSNTGALMRC:1400 SecStr : EEEEE SB HHHHTTSTTB TTT BS HHHHHHHH HHHHHHHHHHHHHHHHTTTT THHHHHHHHHTTTTSS SSTTTGGGSSS SHHHH: ExpBur :eebbbbbbebbbbeebeebeebbeeebebbbbbebbeeeeeeebbebbbebbeebbeeeeeebbebbbbbbbbbbbeeeeebbbbeebbbebeebbbbbb: 2yu9_D_1 1401:SFEETVEILFEAGASAELDDCRGVSENVILGQMAPIGTGAFDVMIDEESL--------------------------------------------------:1450 SecStr :TTSSHHHHHHHHHHS EE SHHHHHHTT TTGGGGS -: ExpBur :bbbebbebeeebbbbbeebebebbbbbebeeeebeeeeeeeeeeeeeee-: |