Protein Model on 2nvz_E_1_S_1 (TEMPLATE: 2nvz )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query F)
1 a FE 1 (B) polymer(polypeptide(L)) [1096 aa] DNA-directed RNA polymerase II 140 kDa polypeptide :RPB2_YEAST
2 b S 1 (B) non-polymer(UTP) URIDINE 5'-TRIPHOSPHATE 766R 769Y 837D 987K 1020R
FOCUSED TEMPLATE
MODEL[1] TEMPLATE:2nvz_E_1
2nvz_E_1       1:XXXXXXXXXXXXXXXXXXXDESAPITAEDSWAVISAFFREKGLVSQQLDSFNQFVDYTLQDIICEDSTLIXXXXXXXXXXXXXXXXXXXISFGKIYVTKP: 100
SecStr          :-------------------  S    STTHHHHHHHHHHSS SSTTHHHHHHHHHTTHHHHHHHTT    -------------------     EEE S :    
ExpBur          :-------------------eeebebeeebbbbbbbbbbeebebbbbbbebbbebbeeebeebbeebbeee-------------------eebeebeeeeb:    

2nvz_E_1     101:MVNESDGVTHALYPQEARLRNLTYSSGLFVDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVFIGRLPIMLRSKNCYLSEATESDLYKLKECPFDMG: 200
SecStr          :  B TTS B    HHHHHHHT   EEEEEE  ------------------------------- EEEEEEE BTTSTTSGGGS  HHHHHHTT  SS   :    
ExpBur          :bbeeeeeeeeebebbebbbbbbbbbbbbebee-------------------------------eeebbbbbbbbebebbebeeeeeeebeebebbeebbb:    

2nvz_E_1     201:GYFIINGSEKVLIAQERSAGNIVQVFKKAAPSPISHVAEIRSALEKGSXXISTLQVKLYGREGSSARTIKATLPYIKQDIPIVIIFRALGIIPDGEILEH: 300
SecStr          :  EEETTEEEEE EEEEE SS EEEE   SSSSEEEEEEEEE  SS  -- EEEEEEEES SS S   EEEE SSSSS   HHHHHHTTT   SSTTTTT:    
ExpBur          :bbbbbebebbbbbbbbeebbbbbbbbeeebeeebbbbbebebeeeeee--eeebebbbeeeeeeeebbbbbebbeeeebbbbbbbbbbbebeeeeebebb:    

2nvz_E_1     301:ICYDVNDWQMLEMLKPCVEDGFVIQDRETALDFIGXXXXXXXXXKEKRIQYAKDILQKEFLPHITQLEGFESRKAFFLGYMINRLLLCALDRKDQDDRDH: 400
SecStr          :S   SS HHHHHHTHHHHHHHTTS SSTTTSTT  ---------  TTSSSSHHHHTTTSSTTT  SSS SHHHHHHHHHHHHHHHHHHH SS    S  :    
ExpBur          :bbbeeeeeebeebbeebeeebeebeeeeebbeeee---------eeeeeeebeebbbeebbbbbbeeeeeeebbbbbbbbbbbbbbbbebeeeeebeebb:    

2nvz_E_1     401:FGKKRLDLAGPLLAQLFKTLFKKLTKDIFRYMQRTVEXXXXXXXXLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLNRYTYSSTLSHLRRTNT: 500
SecStr          :GGGEEEE HHHHHHHHHHHHHHHHHHHHHHHHHHH  --------    THHHHHHHHHHHHHS  SSS  SS   S SEE    S HHHHHHHHTEEE :    
ExpBur          :bbbbbbbbbbebbbebbeebbeebbeebeeeeeeeee--------eeeebebbbebbeebbeebebeeeeeeebeeeebbeebbbbbbbbbbbbbbbbbb:    

2nvz_E_1     501:PIXXXXXXAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCISVGTDPMPIITFLSEWGMEPLEDYVPHQSPDATRVFVNGVWHGVHRNPARLMETL: 600
SecStr          :  ------   SS  GGGTTTB SS    SSSTTTSEEB TT EE     SHHHHHHHTTSS B SSS  SSS TT EEEEESS EEEEES  HHHHHHH:    
ExpBur          :ee------eeeeeeeebbebbbbebbbeeeeeebbbbbbbbbbbbbeeeebeebbeebeeeebeebeebebeeeeebbbbbbbbbbbbbbeebeebbeeb:    

2nvz_E_1     601:RTLRRKGDINPEVSMIRDIREKELKIFTDAGRVYRPLFIVEDDESLGHKELKVRKGHIAKLMATEYQDXXXXXXXXXEYTWSSLLNEGLVEYIDAEEEES: 700
SecStr          :HHHHTTSSS TT EEEEETTTTEEEEE  TT EE   B EES  TT SSEES  HHHHHHHHHHHH  ---------   HHHHHHTTSB   BHHHHTT:    
ExpBur          :beebbeeebeebbbbbeeeeeebbbbbbeebbbbbbbbbbeeeeeeeeebbebbeeebeebeeeeeee---------ebebebbbeebbbbbbbbbbbee:    

2nvz_E_1     701:ILIAMQPEDLEPAEXXXXXXXDVDPAKRIRVSXXATTFTHCEIHPSMILGVAASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTNYNVRMDTMANILYYPQ: 800
SecStr          :  EESSTTTTSS  -------   SSS     --     EE S GGGGS HHHHTSSSGGGS HHHHHHHHHHHTT  S S GGGGG   S  EEESS B:    
ExpBur          :beebebbeebbeee-------eeeeeeeeeee--eeebebbbbbbbbbbbbbbbbbbbbeebeeebbbebbbbbbebbbbbbebeeebbbeebbbbeeee:    
Contact         :                                                                 b  b                               

2nvz_E_1     801:KPLGTTRAMEYLKFRELPAGQNAIVAIACYSGYNQEDSMIMNQSSIDRGLFRSLFFRSYMDQEKKYGMSITETFEKPQRTNTLRMKHGTYDKLDDDGLIA: 900
SecStr          :  SEE GGGGTTT SSS  EE  EEEE  SSSSSTTTEEEE HHHHHHTTT EEEEEEEEE    SSSS   EE    TTSS    SSB  S  TTSB  :    
ExpBur          :ebebbbebbebbebbebbbbbbbebbbbeeeeebeeebbbbbeebbeebbbebbbbbbbeeebeeeeeeeebebeebeeeeeeebeeeebeebeeebbbe:    
Contact         :                                    b                                                               

2nvz_E_1     901:PGVRVSGEDVIIGKTTPISXXXXXXXXXXXXXXXRDASTPLRSTENGIVDQVLVTTNQDGLKFVKVRVRTTKIPQIGDKFASRHGQKGTIGITYRREDMP:1000
SecStr          :TT EEETTB SB EE    --------------- B      TT EEEEEEEEEEE SSS EEEEEEEEEEE   TT  EEETTS B EEEEE  TTTS :    
ExpBur          :eeeebeeebbbbbbbeeee---------------ebebeebeeebebbbbebeeeebeeebebbbbbbebebebeebbebbbbbbbebebeebbeeeebb:    
Contact         :                                                                                      b             

2nvz_E_1    1001:FTAEGIVPDLIINPHAIPSRMTVAHLIECLLSKVAALSGNEGDASPFTDITVEGISKLLREHGYQSRGFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVD:1100
SecStr          :EESS    SEEE TTTTTTTT HHHHHHHHHHHHHHHH   EE  TTSS  HHHHHHHHTTTTS TTSEE EEETTTTEE SS EEEEE  EEE S  HH:    
ExpBur          :ebeeeebbbbbbbeebbeebebebbebbbbbbbbbeeeeeebebbbebeebeeebbeebeeeeeeeebebebeeeeeeeeeeeebbbbbbbbbbbeebee:    
Contact         :                   b                                                                                

2nvz_E_1    1101:DKIHARARGPMQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAASFLKERLMEASDAFRVHICGICGLMTVIAKLNHNQFECKGCDNKIDIYQIHIPYAA:1200
SecStr          :HH    SS  B SSS  B STGGGT      HHHHHHHHHHT  SHHHHTTTTTS   EEEEESSS STT   BTTTTB  BTTTTBSS EEEEE  HHH:    
ExpBur          :eeeeebeeeeeeeebeeebeeeeeebeeeebeeeeeebeeeeeeeeeeeeebeeebeeebbbbeebbbbebeeeeeeeeeebeeeebeeebeeeeeebeb:    

2nvz_E_1    1201:KLLFQELMAMNITPRLYTDRSRD-----------------------------------------------------------------------------:1223
SecStr          :HHHHHHHHHHT       SSS -:    
ExpBur          :beeeeeeeeeeeebeeeeeeee-:    


Input Residue Numbers for Focused Sites

ex) 2,15,123